Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AL669831.3-213ENST00000636676 183 ntBASIC0.74□□□□□ -2.29
TRAV39A0A0B4J263 Y_RNA.72-201ENST00000362894 103 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 RNU6-961P-201ENST00000363893 105 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 Y_RNA.243-201ENST00000364481 109 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 RNU6-1310P-201ENST00000384153 107 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 FCF1P9-201ENST00000412546 282 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 RPS26P48-201ENST00000491713 339 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 AC114811.1-201ENST00000507207 168 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 RNU6-1337P-201ENST00000516525 95 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 AC055872.1-201ENST00000570978 278 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 AL391516.1-201ENST00000554380 2449 ntBASIC0.73□□□□□ -2.29
TRAV39A0A0B4J263 SNORD114-24-201ENST00000365029 72 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 RNU6-969P-201ENST00000383900 105 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 RNU6-767P-201ENST00000384132 107 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 SNORA75.2-201ENST00000391138 150 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 SNORA75.3-201ENST00000391231 150 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 RNU4-14P-201ENST00000410858 122 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 SUMO1P2-201ENST00000452524 304 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 AC116353.2-201ENST00000505332 712 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 MIR3973-201ENST00000579824 107 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 AL008636.1-201ENST00000625038 1018 ntBASIC0.72□□□□□ -2.29
TRAV39A0A0B4J263 RNU6-833P-201ENST00000363486 107 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 SNORD115-30-201ENST00000364117 82 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 RNY3P11-201ENST00000364153 102 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 SNORA69.1-201ENST00000390904 137 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 MLLT10P1-201ENST00000418346 262 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 MTND4P28-201ENST00000426217 387 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 MTND1P4-201ENST00000435196 415 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 RPS20P10-201ENST00000451209 253 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 RNU7-169P-201ENST00000459456 61 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 CYCTP-201ENST00000504253 315 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-264P-201ENST00000517134 104 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 RNU2-12P-201ENST00000517216 168 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 AL358944.1-201ENST00000528537 144 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 AC004832.4-201ENST00000608952 331 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 AL591926.4-201ENST00000616895 298 ntBASIC0.71□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.160-201ENST00000363677 92 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.330-201ENST00000365230 109 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 SNORD116-13-201ENST00000384408 92 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 MIR625-201ENST00000385047 85 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 MIR516B2-201ENST00000385190 85 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-1156P-201ENST00000410365 100 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 AL162725.1-201ENST00000435405 301 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 RPL30P15-201ENST00000457129 321 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 snoU13.25-201ENST00000458945 104 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 RNU7-21P-201ENST00000459430 62 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 MIR3192-201ENST00000584920 77 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 AC006380.1-201ENST00000603598 186 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 AC087588.2-201ENST00000617667 426 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 CASC19-280ENST00000642102 1351 ntBASIC0.7□□□□□ -2.3
TRAV39A0A0B4J263 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-324P-201ENST00000363957 106 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.336-201ENST00000365307 109 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-1105P-201ENST00000384774 107 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 MIR452-201ENST00000385020 85 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 AL031003.1-201ENST00000404229 172 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 MIR1298-201ENST00000408783 112 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.592-201ENST00000410274 109 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.646-201ENST00000410980 101 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-370P-201ENST00000411008 104 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 POLR2J4-204ENST00000418424 324 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 AC245047.8-201ENST00000456455 284 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.635-201ENST00000459041 101 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 SNORA70.12-201ENST00000516084 153 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 MIR2355-201ENST00000517199 87 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 AC011604.1-201ENST00000545978 196 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 AC211469.2-201ENST00000605461 205 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
TRAV39A0A0B4J263 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-845P-201ENST00000362578 103 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.101-201ENST00000363154 102 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 SNORA25.3-201ENST00000363205 127 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.172-201ENST00000363765 102 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 MIR200A-201ENST00000384875 90 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 RPS3AP1-201ENST00000413190 320 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms