Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SNORD14.1-201ENST00000365609 90 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-831P-201ENST00000384548 107 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.557-201ENST00000384680 107 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.559-201ENST00000384686 107 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNA5SP511-201ENST00000410487 115 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC067940.1-201ENST00000458411 300 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SNORA40.9-201ENST00000515895 93 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SNORA74.3-201ENST00000517108 154 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-94P-201ENST00000607728 107 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AL591926.4-201ENST00000616895 298 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC100810.6-201ENST00000638068 285 ntBASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
IGHV3-43A0A0B4J1X8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-874P-201ENST00000362390 105 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNA5SP347-201ENST00000362445 119 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SNORD114-7-201ENST00000362520 77 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNA5SP48-201ENST00000363969 126 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 U8.5-201ENST00000364528 136 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR136-201ENST00000385207 82 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-994P-201ENST00000410507 111 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AL139396.1-201ENST00000421137 167 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MTND1P29-201ENST00000448112 647 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 U8.22-201ENST00000459141 133 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR5000-201ENST00000577717 103 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR4790-201ENST00000577799 79 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC005014.2-201ENST00000607795 599 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AF250324.2-201ENST00000608299 610 ntBASIC0.37□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNY1P16-201ENST00000363063 111 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.243-201ENST00000364481 109 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.402-201ENST00000383972 102 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.473-201ENST00000384333 102 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-1148P-201ENST00000410992 104 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MTCYBP10-201ENST00000424905 650 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC092423.1-201ENST00000430165 186 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AL353997.1-201ENST00000432936 108 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RN7SKP164-201ENST00000516138 266 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 SNORA18.7-201ENST00000516910 131 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC105029.1-201ENST00000520250 669 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC245505.1-201ENST00000556398 224 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR4762-201ENST00000585261 75 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC009229.3-201ENST00000608056 282 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AL136317.1-201ENST00000612653 226 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.36□□□□□ -2.35
IGHV3-43A0A0B4J1X8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.2-201ENST00000362330 96 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.358-201ENST00000365491 99 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-318P-201ENST00000384283 103 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR499A-201ENST00000384903 122 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MIR15B-201ENST00000385045 98 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU1-119P-201ENST00000391122 165 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNA5SP247-201ENST00000411181 105 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MTND3P21-201ENST00000433774 331 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC098826.2-201ENST00000452011 651 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 RNU6-1337P-201ENST00000516525 95 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 MTND2P38-201ENST00000522536 667 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC011195.1-201ENST00000578177 177 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 AC018462.2-201ENST00000605375 395 ntBASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
IGHV3-43A0A0B4J1X8 Y_RNA.41-201ENST00000362646 102 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1310P-201ENST00000384153 107 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1067P-201ENST00000384752 107 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AL390729.2-201ENST00000416137 156 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MLLT10P1-201ENST00000418346 262 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC244098.3-201ENST00000424803 96 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU7-43P-201ENST00000516554 64 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC036111.3-201ENST00000526389 112 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Z83818.1-201ENST00000603584 150 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC103591.3-201ENST00000608684 209 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC027514.1-201ENST00000588561 1603 ntBASIC0.34□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1084P-201ENST00000362498 107 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.157-201ENST00000363638 102 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD115-30-201ENST00000364117 82 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.361-201ENST00000365515 120 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC117470.1-201ENST00000381974 330 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.517-201ENST00000384551 106 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR181A1-201ENST00000385026 110 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD111-201ENST00000408139 94 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD12B-201ENST00000410433 91 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms