Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 AC134026.1-201ENST00000623249 2239 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 Y_RNA.121-201ENST00000363309 113 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 Y_RNA.238-201ENST00000364441 102 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 RNY1P5-201ENST00000383890 115 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 SNORA20B-201ENST00000384220 132 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 RNU6-804P-201ENST00000384286 107 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 SNORD14D-201ENST00000384390 87 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 RNU6-381P-201ENST00000391259 108 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 RNU5E-9P-201ENST00000411164 104 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 AC016717.1-201ENST00000448918 286 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 RPL23AP7-203ENST00000449021 469 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 SNORD65B-201ENST00000459126 73 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 AC114982.1-201ENST00000469402 321 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 MIR3144-201ENST00000579460 79 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
USP15Q9Y4E8 AC009487.4-201ENST00000624969 3585 ntBASIC2.6□□□□□ -1.99
USP15Q9Y4E8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
USP15Q9Y4E8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.59□□□□□ -1.99
USP15Q9Y4E8 AL157777.2-201ENST00000258070 137 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 RNU6-899P-201ENST00000363947 107 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 MTCO2P33-201ENST00000402100 465 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 AC074290.1-201ENST00000448883 135 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 RNU7-141P-201ENST00000459304 62 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 RNA5SP281-201ENST00000516504 135 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 RNU6-965P-201ENST00000516721 96 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 MTND5P41-201ENST00000517498 206 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 AC022616.8-201ENST00000533569 253 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 AC108706.1-201ENST00000611053 297 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 U4atac.1-201ENST00000618345 95 ntBASIC2.59□□□□□ -1.99
USP15Q9Y4E8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.59□□□□□ -1.99
USP15Q9Y4E8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
USP15Q9Y4E8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
USP15Q9Y4E8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
USP15Q9Y4E8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USP15Q9Y4E8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP15Q9Y4E8 SNORA27.1-201ENST00000362604 124 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU1-23P-201ENST00000363361 144 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 MIR626-201ENST00000385032 94 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU2-2P-201ENST00000410396 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU6-57P-201ENST00000411348 103 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 HMGN2P18-201ENST00000450680 270 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.58□□□□□ -2
USP15Q9Y4E8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU7-200P-201ENST00000516105 62 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU6-948P-201ENST00000516374 107 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 AC021269.2-201ENST00000532318 330 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.58□□□□□ -2
USP15Q9Y4E8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.58□□□□□ -2
USP15Q9Y4E8 MIR3910-1-201ENST00000580936 111 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU2-4P-201ENST00000606190 192 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 AC104465.1-201ENST00000611365 139 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 U2.10-201ENST00000620268 191 ntBASIC2.58□□□□□ -2
USP15Q9Y4E8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
USP15Q9Y4E8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
USP15Q9Y4E8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
USP15Q9Y4E8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USP15Q9Y4E8 Y_RNA.75-201ENST00000362927 97 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 snoU2_19.4-201ENST00000364329 80 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU4-10P-201ENST00000364383 140 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU6-312P-201ENST00000364629 107 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU6-546P-201ENST00000383991 107 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 Y_RNA.412-201ENST00000384001 104 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU2-32P-201ENST00000411193 191 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 HSPE1P13-201ENST00000451143 297 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RPS20P10-201ENST00000451209 253 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 AC010598.1-201ENST00000510378 103 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 AC025647.1-201ENST00000517879 253 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 AC046143.2-201ENST00000609789 160 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 AL353997.5-201ENST00000618886 171 ntBASIC2.57□□□□□ -2
USP15Q9Y4E8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
USP15Q9Y4E8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USP15Q9Y4E8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USP15Q9Y4E8 Y_RNA.398-201ENST00000383952 99 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 RNU6-418P-201ENST00000384035 107 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms