Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL445435.1-201ENST00000604232 665 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 AC099785.1-201ENST00000605697 437 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 AC105081.1-201ENST00000617727 106 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 AC078880.5-201ENST00000617845 421 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 AC244669.1-204ENST00000621564 178 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 AC005609.4-201ENST00000625071 447 ntBASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.23□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 SNORD115-2-201ENST00000362842 82 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 RNY3P13-201ENST00000365542 102 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 MIR204-201ENST00000385200 110 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 MTCO2P33-201ENST00000402100 465 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 MTCO3P8-201ENST00000453691 755 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 SNORA31.14-201ENST00000516728 116 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 MIR4639-201ENST00000584938 69 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 AL450270.1-201ENST00000606160 391 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 AC012467.1-201ENST00000607740 256 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 AC084368.1-201ENST00000620935 65 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 MIR198-201ENST00000637333 62 ntBASIC-1.24□□□□□ -2.61
UBE2D4Q9Y2X8 RNY3-201ENST00000365484 102 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-116P-201ENST00000384042 109 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 ZNF114P1-201ENST00000453500 292 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 RNA5SP454-201ENST00000517231 127 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AC087683.1-201ENST00000591187 441 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AP000907.4-201ENST00000604143 237 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AL139418.1-201ENST00000613613 177 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 SNORA43.4-201ENST00000629559 138 ntBASIC-1.25□□□□□ -2.61
UBE2D4Q9Y2X8 AC010332.2-201ENST00000613083 1904 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC117470.1-201ENST00000381974 330 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-25P-201ENST00000383873 107 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-29P-201ENST00000384637 107 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RPS29P13-201ENST00000402041 169 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 MCFD2P1-201ENST00000417812 300 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 MTCO1P27-201ENST00000448269 226 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RNU7-62P-201ENST00000458856 62 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 MTND3P25-201ENST00000509243 135 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-135P-201ENST00000516769 101 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-430P-201ENST00000517078 107 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC068587.4-201ENST00000533893 186 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 MIR4306-201ENST00000583390 91 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC091178.2-201ENST00000584401 117 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC069545.1-201ENST00000605671 358 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC144521.1-201ENST00000607148 956 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 AC008873.1-201ENST00000625051 138 ntBASIC-1.26□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 SNORA22B-201ENST00000383876 138 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 SNORD28B-201ENST00000390993 75 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 MIR1257-201ENST00000408490 117 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-721P-201ENST00000410155 105 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 SNRPGP10-201ENST00000432323 225 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 AC091959.1-201ENST00000495857 238 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 MTCO3P42-201ENST00000509488 518 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 MTCO3P39-201ENST00000514812 518 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 RNU2-10P-201ENST00000516375 211 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 MIR5708-201ENST00000579723 85 ntBASIC-1.27□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-490P-201ENST00000362985 107 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 SNORA63C-201ENST00000364578 129 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 RNU6-607P-201ENST00000411283 108 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 MIR18B-201ENST00000454574 71 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 snoU13.6-201ENST00000458785 104 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 AC072039.2-201ENST00000608883 439 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 AC012409.4-201ENST00000612923 249 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 MIR8066-201ENST00000617280 78 ntBASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.28□□□□□ -2.61
UBE2D4Q9Y2X8 CALM2P2-201ENST00000428512 440 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 AL445193.1-201ENST00000441183 141 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 MRPS10P1-201ENST00000448483 130 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 AC117522.1-201ENST00000509821 380 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 AL157687.1-201ENST00000554853 619 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 MTND4P33-201ENST00000556706 766 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 MIR4280-201ENST00000582178 76 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 MIR548AR-201ENST00000582191 57 ntBASIC-1.29□□□□□ -2.62
UBE2D4Q9Y2X8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms