Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 Y_RNA.267-201ENST00000364679 109 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 RNU1-93P-201ENST00000364704 169 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.577-201ENST00000384794 101 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 SNORA69.1-201ENST00000390904 137 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.599-201ENST00000410489 109 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 PDCL2P1-201ENST00000419302 352 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AL137792.2-201ENST00000443484 235 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 RNU6-1213P-201ENST00000517075 94 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AP002004.2-201ENST00000531656 154 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AC091178.2-201ENST00000584401 117 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AC136443.5-201ENST00000603741 370 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AC005828.6-201ENST00000606610 232 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AC022306.2-201ENST00000617563 647 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 AC127459.3-201ENST00000624328 466 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 RNU6-454P-201ENST00000364292 107 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 SNORD81.2-201ENST00000365153 76 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 RNU4-14P-201ENST00000410858 122 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 RNU6-370P-201ENST00000411008 104 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 MTND4P28-201ENST00000426217 387 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 MTND4P17-201ENST00000470444 350 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 AC092991.1-201ENST00000477176 376 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 AP002001.1-203ENST00000534002 267 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 AC106754.2-201ENST00000623006 233 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
CLCF1Q9UBD9 RNU6-199P-201ENST00000362954 107 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 RNU6-1188P-201ENST00000363795 107 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.243-201ENST00000364481 109 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 RNU6-424P-201ENST00000384367 105 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 MIR520G-201ENST00000385064 90 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 RNA5SP482-201ENST00000391269 118 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 SNORA75.6-201ENST00000391318 127 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 RNU6-1156P-201ENST00000410365 100 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 OR9P1P-201ENST00000496431 281 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 MIR4778-201ENST00000577635 80 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
CLCF1Q9UBD9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 SNORA1B-201ENST00000362535 133 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 SNORD114-22-201ENST00000365423 72 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 RNU6-310P-201ENST00000384655 107 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.592-201ENST00000410274 109 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.646-201ENST00000410980 101 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 CALM2P4-201ENST00000430810 426 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AC022493.2-201ENST00000506122 481 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 RNU6-408P-201ENST00000515910 100 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 RNU6-1291P-201ENST00000516591 104 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 RNU6-922P-201ENST00000516753 99 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 RNU7-4P-201ENST00000516961 62 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AC144568.1-201ENST00000520139 137 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AL358944.1-201ENST00000528537 144 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AC025253.1-201ENST00000613623 543 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 AC087588.2-201ENST00000617667 426 ntBASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
CLCF1Q9UBD9 RNU6-117P-201ENST00000365415 107 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 MIR653-201ENST00000385279 96 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 U8.16-201ENST00000391279 133 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 RNU5A-5P-201ENST00000411054 116 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC233266.1-201ENST00000454518 96 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AL049830.1-201ENST00000468034 425 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 RNU6-322P-201ENST00000516010 103 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 RNU7-12P-201ENST00000516030 62 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 RNU6-165P-201ENST00000517170 99 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC113139.1-201ENST00000605049 239 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC242852.1-201ENST00000612151 96 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC133104.2-201ENST00000615272 193 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC244015.1-201ENST00000622301 99 ntBASIC0.91□□□□□ -2.26
CLCF1Q9UBD9 AC005592.1-201ENST00000566527 1640 ntBASIC0.9□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 SNORA2.2-201ENST00000365473 135 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AL451046.2-201ENST00000403074 277 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 AC098614.3-201ENST00000438957 440 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 DYNLT3P2-201ENST00000442517 295 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 FCF1P4-201ENST00000448326 183 ntBASIC0.9□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.653-201ENST00000459091 95 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms