Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 USP9YP30-201ENST00000430729 455 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 Z98949.2-201ENST00000440996 144 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 AC093019.1-201ENST00000443135 252 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 UBE2V1P7-201ENST00000446395 340 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 MTND1P29-201ENST00000448112 647 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 RNU6-506P-201ENST00000516553 94 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 RNU6-1116P-201ENST00000517269 99 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 MIR6128-201ENST00000615528 109 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 AC027279.3-201ENST00000625055 122 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 MIR3662-201ENST00000637030 95 ntBASIC0.75□□□□□ -2.29
HPF1Q9NWY4 RNU6-1090P-201ENST00000364065 94 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6-879P-201ENST00000364328 108 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6-117P-201ENST00000365415 107 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 Y_RNA.559-201ENST00000384686 107 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6-700P-201ENST00000391043 107 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 MIR190B-201ENST00000401119 79 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AL139396.1-201ENST00000421137 167 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU7-87P-201ENST00000459343 62 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 RNU6-1314P-201ENST00000517139 104 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AC018448.1-201ENST00000552843 316 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 AL357075.2-201ENST00000614906 189 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
HPF1Q9NWY4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HPF1Q9NWY4 MIR103A2-201ENST00000362154 78 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 MIR410-201ENST00000362222 80 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 RNA5SP264-201ENST00000363115 107 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 Y_RNA.364-201ENST00000365532 101 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 RNA5SP475-201ENST00000410568 110 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 MTND3P21-201ENST00000433774 331 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 MTND1P17-201ENST00000448961 204 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 RNU6-625P-201ENST00000459412 107 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 snoU13.18-201ENST00000459483 104 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.73□□□□□ -2.29
HPF1Q9NWY4 MIR3192-201ENST00000584920 77 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 RMST_2.1-201ENST00000617263 136 ntBASIC0.73□□□□□ -2.29
HPF1Q9NWY4 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 SNORD68-201ENST00000363214 84 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 Y_RNA.402-201ENST00000383972 102 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 RNU6-842P-201ENST00000384269 107 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 PIGPP3-201ENST00000425307 415 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 SNORD5.1-201ENST00000458800 75 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 snoU13.25-201ENST00000458945 104 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.72□□□□□ -2.29
HPF1Q9NWY4 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 RNU6-566P-201ENST00000516790 107 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 AL008636.1-201ENST00000625038 1018 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 MIR3674-201ENST00000636576 68 ntBASIC0.72□□□□□ -2.29
HPF1Q9NWY4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 RNU6-136P-201ENST00000384663 107 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.71□□□□□ -2.3
HPF1Q9NWY4 RPS20P10-201ENST00000451209 253 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 RNU6-1088P-201ENST00000516850 104 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 MTND2P38-201ENST00000522536 667 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 AC245505.1-201ENST00000556398 224 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 AC005828.6-201ENST00000606610 232 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 AC007014.2-201ENST00000615581 479 ntBASIC0.71□□□□□ -2.3
HPF1Q9NWY4 Y_RNA.796-201ENST00000364268 102 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 Y_RNA.799-201ENST00000364992 102 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.7□□□□□ -2.3
HPF1Q9NWY4 AC023442.1-201ENST00000531247 422 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
HPF1Q9NWY4 MIR5701-3-201ENST00000578890 82 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 MIR5701-1-201ENST00000585138 82 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 MIR5701-2-201ENST00000615634 82 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 AC100810.6-201ENST00000638068 285 ntBASIC0.7□□□□□ -2.3
HPF1Q9NWY4 SNORD114-7-201ENST00000362520 77 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HPF1Q9NWY4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 MTCYBP10-201ENST00000424905 650 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 DLGAP5P1-201ENST00000430307 464 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 AC114811.1-201ENST00000507207 168 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 AC023827.1-201ENST00000569247 97 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 MIR4790-201ENST00000577799 79 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 SEPT14P17-201ENST00000617978 177 ntBASIC0.69□□□□□ -2.3
HPF1Q9NWY4 RNU6-831P-201ENST00000384548 107 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 MIR181A1-201ENST00000385026 110 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HPF1Q9NWY4 RNA5SP118-201ENST00000410385 109 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms