Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.09□□□□□ -2.42
TREM1Q9NP99 MIR371B-201ENST00000638082 66 ntBASIC-0.09□□□□□ -2.42
TREM1Q9NP99 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 RNU6-128P-201ENST00000383976 107 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 MT-TH-201ENST00000387441 69 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.1□□□□□ -2.43
TREM1Q9NP99 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 MTND3P3-201ENST00000505004 126 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.1□□□□□ -2.43
TREM1Q9NP99 RNA5SP436-201ENST00000516020 115 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 RNU6-977P-201ENST00000516411 103 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 MIR3915-201ENST00000578518 97 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 AF250324.2-201ENST00000608299 610 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 AC092807.2-201ENST00000609367 243 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 uc_338.16-201ENST00000621804 95 ntBASIC-0.1□□□□□ -2.43
TREM1Q9NP99 SNORD114-7-201ENST00000362520 77 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 RNA5SP517-201ENST00000364724 117 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 RNU6-815P-201ENST00000384080 113 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 RNA5SP95-201ENST00000410319 137 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.11□□□□□ -2.43
TREM1Q9NP99 AC073464.1-201ENST00000429823 534 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 RNA5SP401-201ENST00000515920 127 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 SNORA40.12-201ENST00000516329 111 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 POLR3GP2-201ENST00000588366 668 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 FAM157A-202ENST00000615155 405 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 MIR6718-201ENST00000616153 80 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 AL591926.4-201ENST00000616895 298 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 AC007494.3-201ENST00000624660 743 ntBASIC-0.11□□□□□ -2.43
TREM1Q9NP99 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
TREM1Q9NP99 RNU6-396P-201ENST00000365369 105 ntBASIC-0.12□□□□□ -2.43
TREM1Q9NP99 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
TREM1Q9NP99 SNORD83.1-201ENST00000411362 77 ntBASIC-0.12□□□□□ -2.43
TREM1Q9NP99 MTND1P26-201ENST00000440488 538 ntBASIC-0.12□□□□□ -2.43
TREM1Q9NP99 RNU7-187P-201ENST00000458985 68 ntBASIC-0.12□□□□□ -2.43
TREM1Q9NP99 AC060788.1-201ENST00000521318 469 ntBASIC-0.12□□□□□ -2.43
TREM1Q9NP99 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.12□□□□□ -2.43
TREM1Q9NP99 AC121333.1-201ENST00000567488 2709 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 MIR377-201ENST00000362145 69 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 AL139396.1-201ENST00000421137 167 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.13□□□□□ -2.43
TREM1Q9NP99 HMGN2P32-201ENST00000444648 269 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.13□□□□□ -2.43
TREM1Q9NP99 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.13□□□□□ -2.43
TREM1Q9NP99 AL355375.2-201ENST00000574825 175 ntBASIC-0.13□□□□□ -2.43
TREM1Q9NP99 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.13□□□□□ -2.43
TREM1Q9NP99 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 RNY1-201ENST00000364228 113 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 RNU6-679P-201ENST00000391003 106 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.14□□□□□ -2.43
TREM1Q9NP99 AL365203.2-201ENST00000423444 196 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 MTCO2P19-201ENST00000427513 598 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 AL606489.2-201ENST00000433886 234 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.14□□□□□ -2.43
TREM1Q9NP99 RNU7-175P-201ENST00000515915 61 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 ACA59.1-201ENST00000515966 143 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 MIR548AO-201ENST00000579992 96 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 RN7SL793P-201ENST00000583259 296 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 AC005828.6-201ENST00000606610 232 ntBASIC-0.14□□□□□ -2.43
TREM1Q9NP99 SNORD118-201ENST00000363593 134 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 RNU6-580P-201ENST00000365159 107 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 RNU6-281P-201ENST00000384212 103 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 RNU6-136P-201ENST00000384663 107 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 MIR193B-201ENST00000384907 83 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 MT-TN-201ENST00000387400 73 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 SNORA26.8-201ENST00000391306 124 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 AC112693.2-201ENST00000556538 232 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 MIR4290-201ENST00000583807 95 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 U6.115-201ENST00000636045 103 ntBASIC-0.15□□□□□ -2.43
TREM1Q9NP99 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.15□□□□□ -2.43
TREM1Q9NP99 RNU6-222P-201ENST00000362438 107 ntBASIC-0.16□□□□□ -2.44
TREM1Q9NP99 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.16□□□□□ -2.44
TREM1Q9NP99 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.16□□□□□ -2.44
TREM1Q9NP99 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
TREM1Q9NP99 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.16□□□□□ -2.44
TREM1Q9NP99 RNU4-77P-201ENST00000516692 156 ntBASIC-0.16□□□□□ -2.44
TREM1Q9NP99 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.16□□□□□ -2.44
TREM1Q9NP99 MIR410-201ENST00000362222 80 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 RNU6-934P-201ENST00000365154 107 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 RNY1P4-201ENST00000384595 115 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 RNA5SP63-201ENST00000391225 112 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 AL354751.2-201ENST00000415471 210 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 AL031667.1-201ENST00000440222 725 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 UQCRBP2-201ENST00000447827 297 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 SNORD45.4-201ENST00000516629 73 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.17□□□□□ -2.44
TREM1Q9NP99 AC012433.1-201ENST00000588916 398 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 AC245884.10-201ENST00000597355 337 ntBASIC-0.17□□□□□ -2.44
TREM1Q9NP99 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.17□□□□□ -2.44
TREM1Q9NP99 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 SNORD114-5-201ENST00000362928 70 ntBASIC-0.18□□□□□ -2.44
TREM1Q9NP99 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms