Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Z98742.3-201ENST00000418637 326 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 AL445646.1-201ENST00000431784 216 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 snoU13.9-201ENST00000458927 103 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 RPS29P21-201ENST00000496272 170 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 RNU6-1291P-201ENST00000516591 104 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 RNU6-1137P-201ENST00000517073 99 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 AC015720.1-201ENST00000565251 277 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 AC044792.1-201ENST00000593294 196 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 SNORA1B-201ENST00000362535 133 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.286-201ENST00000364813 102 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.510-201ENST00000384511 114 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 AC019129.1-201ENST00000403786 261 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 RNU6-101P-201ENST00000410323 104 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 AL162725.1-201ENST00000435405 301 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 RNU6-897P-201ENST00000517135 105 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.721-201ENST00000517207 102 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 AC015688.6-201ENST00000577737 104 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 MIR4680-201ENST00000580906 66 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 DEFB117-201ENST00000602356 141 ntBASIC1.56□□□□□ -2.16
CHMP1AQ9HD42 ICE2P2-201ENST00000483823 2787 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.202-201ENST00000364083 110 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.527-201ENST00000384573 102 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 RNU11-5P-201ENST00000391216 129 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 OOSP1P1-201ENST00000423265 274 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AC005534.2-201ENST00000431047 433 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 STAG3L5P-204ENST00000443759 179 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 RNU6-1096P-201ENST00000517089 102 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 MIR4419B-201ENST00000577260 68 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 MIR4300-201ENST00000581016 96 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AC004832.4-201ENST00000608952 331 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AC064859.1-201ENST00000624741 174 ntBASIC1.55□□□□□ -2.16
CHMP1AQ9HD42 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.105-201ENST00000363182 111 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.183-201ENST00000363882 113 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 MIR520G-201ENST00000385064 90 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 RN7SKP223-201ENST00000410582 62 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 RPS4XP11-201ENST00000446897 772 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 AC113195.1-201ENST00000579952 141 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.54□□□□□ -2.16
CHMP1AQ9HD42 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 SNORA33.2-201ENST00000365413 134 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.380-201ENST00000365663 111 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AC117470.1-201ENST00000381974 330 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.455-201ENST00000384230 98 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 RNU6-21P-201ENST00000384710 107 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 SNORD115-46-201ENST00000390982 71 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AL034345.1-201ENST00000407768 123 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 RNU6-121P-201ENST00000410525 99 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 OR9P1P-201ENST00000496431 281 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AP002004.2-201ENST00000531656 154 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 MIR3145-201ENST00000580727 82 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 MIR4672-201ENST00000583126 81 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AL590808.1-201ENST00000618696 141 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 AC131280.1-202ENST00000624067 4211 ntBASIC1.53□□□□□ -2.16
CHMP1AQ9HD42 MIR449A-201ENST00000362113 91 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 RNU6-1123P-201ENST00000362347 106 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 RNU6-102P-201ENST00000384485 104 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 MIR562-201ENST00000384894 95 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 ELOCP20-201ENST00000422460 345 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 AL135790.2-201ENST00000437701 267 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 RPS20P10-201ENST00000451209 253 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 AC233266.1-201ENST00000454518 96 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 RNU2-56P-201ENST00000516826 190 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 AL162424.1-201ENST00000602325 221 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 SNORD113-5-201ENST00000607261 78 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 AC242852.1-201ENST00000612151 96 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 MIR376A1-201ENST00000616574 68 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 AC244015.1-201ENST00000622301 99 ntBASIC1.52□□□□□ -2.17
CHMP1AQ9HD42 SNORD113-8-201ENST00000363497 74 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.153-201ENST00000363615 91 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms