Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 MTND2P22-201ENST00000444325 1033 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AC113410.1-201ENST00000505029 247 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 SNORA40.9-201ENST00000515895 93 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 MTND4LP26-201ENST00000518144 282 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AC025627.3-201ENST00000582078 182 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 MIR3192-201ENST00000584920 77 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AF250324.2-201ENST00000608299 610 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AC015540.1-201ENST00000615828 501 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 SEPT14P17-201ENST00000617978 177 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 AC100810.6-201ENST00000638068 285 ntBASIC0.47□□□□□ -2.33
SND1-IT1Q9HBX3 Y_RNA.48-201ENST00000362710 103 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 RNY1P16-201ENST00000363063 111 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.140-201ENST00000363474 103 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 RNU4-24P-201ENST00000364565 139 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.301-201ENST00000364990 103 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.450-201ENST00000384198 113 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.517-201ENST00000384551 106 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.557-201ENST00000384680 107 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 AL162725.1-201ENST00000435405 301 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Z83846.1-201ENST00000446798 265 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 U7.7-201ENST00000459276 60 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 MTND5P5-201ENST00000503764 376 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 SNORA74.3-201ENST00000517108 154 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 MIR2355-201ENST00000517199 87 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 AC004817.2-201ENST00000561794 651 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 MIR3973-201ENST00000579824 107 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 AC093913.1-201ENST00000614178 329 ntBASIC0.46□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 SNORD68-201ENST00000363214 84 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AL354751.2-201ENST00000415471 210 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 PIGPP3-201ENST00000425307 415 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 RNU7-87P-201ENST00000459343 62 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AL163540.1-201ENST00000485382 386 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC117454.1-201ENST00000491120 168 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC114811.1-201ENST00000507207 168 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC026782.1-201ENST00000512952 449 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC022616.4-201ENST00000522985 181 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC131055.1-201ENST00000584626 316 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC103591.3-201ENST00000608684 209 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 AC108706.1-201ENST00000611053 297 ntBASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.45□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-874P-201ENST00000362390 105 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RNA5SP99-201ENST00000364020 114 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 SNORD14.1-201ENST00000365609 90 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AC117470.1-201ENST00000381974 330 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 MIR136-201ENST00000385207 82 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 MIR1298-201ENST00000408783 112 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-733P-201ENST00000410759 104 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RPS20P10-201ENST00000451209 253 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AC067940.1-201ENST00000458411 300 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 U8.19-201ENST00000459095 133 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 U8.22-201ENST00000459141 133 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RPS29P25-201ENST00000481709 171 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RNU7-43P-201ENST00000516554 64 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 RNU11-2P-201ENST00000516898 142 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AC023442.1-201ENST00000531247 422 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AC109810.1-201ENST00000534066 224 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AL136317.1-201ENST00000612653 226 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 AL591926.4-201ENST00000616895 298 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 U4.5-201ENST00000617137 123 ntBASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.44□□□□□ -2.34
SND1-IT1Q9HBX3 SNORD115-30-201ENST00000364117 82 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNU4-12P-201ENST00000365233 139 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-318P-201ENST00000384283 103 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 SNORD89-201ENST00000390981 114 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 MIR1185-1-201ENST00000408598 86 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.594-201ENST00000410373 140 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 AC004941.2-201ENST00000427009 228 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RPL23AP50-201ENST00000434149 455 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 HMGN2P32-201ENST00000444648 269 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-113P-201ENST00000516653 101 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-63P-201ENST00000516690 95 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNU6-307P-201ENST00000516743 106 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 RNU2-12P-201ENST00000517216 168 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 AC005899.2-201ENST00000584353 90 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 AP000942.3-201ENST00000603702 160 ntBASIC0.43□□□□□ -2.34
SND1-IT1Q9HBX3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SND1-IT1Q9HBX3 SNORD114-27-201ENST00000363766 70 ntBASIC0.42□□□□□ -2.34
SND1-IT1Q9HBX3 Y_RNA.295-201ENST00000364918 102 ntBASIC0.42□□□□□ -2.34
SND1-IT1Q9HBX3 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
SND1-IT1Q9HBX3 MIR520C-201ENST00000385005 87 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms