Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.166-201ENST00000363730 102 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 SNORA25.9-201ENST00000365087 128 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.11□□□□□ -2.23
ZNF560Q96MR9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 SNORD12B-201ENST00000410433 91 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.11□□□□□ -2.23
ZNF560Q96MR9 AC114482.1-201ENST00000418010 247 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 AC105758.1-201ENST00000506038 399 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 RNU6-322P-201ENST00000516010 103 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 SNORA31.4-201ENST00000516049 129 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 Y_RNA.691-201ENST00000516611 103 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.11□□□□□ -2.23
ZNF560Q96MR9 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.11□□□□□ -2.23
ZNF560Q96MR9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
ZNF560Q96MR9 Y_RNA.279-201ENST00000364763 95 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 SNORD41-201ENST00000386967 70 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 AL451046.2-201ENST00000403074 277 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIR2053-201ENST00000459295 91 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 AL049830.1-201ENST00000468034 425 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.1□□□□□ -2.23
ZNF560Q96MR9 AC022493.2-201ENST00000506122 481 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIR1244-1-201ENST00000612829 85 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIR1244-3-201ENST00000635744 85 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIR1244-2-201ENST00000636449 85 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIR1244-4-202ENST00000636813 85 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 AC005592.1-201ENST00000566527 1640 ntBASIC1.1□□□□□ -2.23
ZNF560Q96MR9 MIRLET7C-201ENST00000362160 84 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 RNU6-99P-201ENST00000364721 107 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 Y_RNA.361-201ENST00000365515 120 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 Y_RNA.577-201ENST00000384794 101 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 RNU7-12P-201ENST00000516030 62 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 AL669831.3-213ENST00000636676 183 ntBASIC1.09□□□□□ -2.23
ZNF560Q96MR9 CASC19-280ENST00000642102 1351 ntBASIC1.08□□□□□ -2.24
ZNF560Q96MR9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
ZNF560Q96MR9 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
ZNF560Q96MR9 MTND4P28-201ENST00000426217 387 ntBASIC1.08□□□□□ -2.24
ZNF560Q96MR9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
ZNF560Q96MR9 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
ZNF560Q96MR9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.08□□□□□ -2.24
ZNF560Q96MR9 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
ZNF560Q96MR9 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
ZNF560Q96MR9 RNU4-79P-201ENST00000362764 141 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.124-201ENST00000363339 93 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 MIR625-201ENST00000385047 85 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF560Q96MR9 AC245047.7-201ENST00000440265 293 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.635-201ENST00000459041 101 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.07□□□□□ -2.24
ZNF560Q96MR9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF560Q96MR9 U6atac.1-201ENST00000616025 117 ntBASIC1.07□□□□□ -2.24
ZNF560Q96MR9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.160-201ENST00000363677 92 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 SNORA69.1-201ENST00000390904 137 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF560Q96MR9 Z98949.2-201ENST00000440996 144 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC233266.1-201ENST00000454518 96 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 RNU6-264P-201ENST00000517134 104 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 RNU2-12P-201ENST00000517216 168 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 MTND4LP26-201ENST00000518144 282 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC242852.1-201ENST00000612151 96 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC092794.1-201ENST00000612734 582 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC087588.2-201ENST00000617667 426 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC244015.1-201ENST00000622301 99 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AC098679.4-201ENST00000624241 654 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
ZNF560Q96MR9 RNU4-41P-201ENST00000364426 143 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 SNORA75.6-201ENST00000391318 127 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.592-201ENST00000410274 109 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 RNU6-1156P-201ENST00000410365 100 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 RNU4-14P-201ENST00000410858 122 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF560Q96MR9 HSPE1P13-201ENST00000451143 297 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 RNU6-408P-201ENST00000515910 100 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 SNORA70.12-201ENST00000516084 153 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 RNU6-1213P-201ENST00000517075 94 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms