Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
CCDC47Q96A33 RPEP5-201ENST00000441137 268 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 RNU6-625P-201ENST00000459412 107 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 AC022868.1-201ENST00000517767 391 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 AL358944.1-201ENST00000528537 144 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 AC018462.2-201ENST00000605375 395 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 AC012557.2-201ENST00000605919 418 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 AL391903.3-201ENST00000612158 163 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 MIR3674-201ENST00000636576 68 ntBASIC0.88□□□□□ -2.27
CCDC47Q96A33 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC47Q96A33 CASC19-280ENST00000642102 1351 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 MIR410-201ENST00000362222 80 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 RNU6-874P-201ENST00000362390 105 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 RNU6-454P-201ENST00000364292 107 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 Y_RNA.295-201ENST00000364918 102 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 Y_RNA.450-201ENST00000384198 113 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 RNU6-163P-201ENST00000384396 106 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 MTCYBP10-201ENST00000424905 650 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 snoU13.25-201ENST00000458945 104 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 CYCTP-201ENST00000504253 315 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 RNA5SP255-201ENST00000516370 107 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 RNU6-63P-201ENST00000516690 95 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 MIR3192-201ENST00000584920 77 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 MIR4781-201ENST00000585250 76 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 AC120024.3-201ENST00000603167 156 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
CCDC47Q96A33 Y_RNA.2-201ENST00000362330 96 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 RNU4-12P-201ENST00000365233 139 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 Y_RNA.573-201ENST00000384763 105 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 PIGPP3-201ENST00000425307 415 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 AL353997.1-201ENST00000432936 108 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 Z83846.1-201ENST00000446798 265 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 U8.22-201ENST00000459141 133 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 MTND5P5-201ENST00000503764 376 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 RNU4-49P-201ENST00000516080 140 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 Y_RNA.682-201ENST00000516457 100 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 AC105029.1-201ENST00000520250 669 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 AC005828.6-201ENST00000606610 232 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CCDC47Q96A33 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
CCDC47Q96A33 RNY1P16-201ENST00000363063 111 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 Y_RNA.336-201ENST00000365307 109 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 AC074085.1-201ENST00000413598 418 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 SUMO1P2-201ENST00000452524 304 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 AC026782.1-201ENST00000512952 449 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.85□□□□□ -2.27
CCDC47Q96A33 SNORA70.12-201ENST00000516084 153 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC47Q96A33 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC47Q96A33 AL008636.1-201ENST00000625038 1018 ntBASIC0.85□□□□□ -2.27
CCDC47Q96A33 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 MIR337-201ENST00000362281 93 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 SNORD68-201ENST00000363214 84 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 Y_RNA.358-201ENST00000365491 99 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC47Q96A33 SNORA40.9-201ENST00000515895 93 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 RNU6-1016P-201ENST00000516689 94 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 AC108706.1-201ENST00000611053 297 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 AC027279.3-201ENST00000625055 122 ntBASIC0.84□□□□□ -2.27
CCDC47Q96A33 Y_RNA.330-201ENST00000365230 109 ntBASIC0.83□□□□□ -2.28
CCDC47Q96A33 Y_RNA.594-201ENST00000410373 140 ntBASIC0.83□□□□□ -2.28
CCDC47Q96A33 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC47Q96A33 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
CCDC47Q96A33 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC47Q96A33 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC47Q96A33 RNU6-318P-201ENST00000384283 103 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 MIR452-201ENST00000385020 85 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 RNU6-1050P-201ENST00000410388 107 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 Y_RNA.621-201ENST00000411065 96 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 AL354751.2-201ENST00000415471 210 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 ELOCP24-201ENST00000456370 334 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 AC114811.1-201ENST00000507207 168 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
CCDC47Q96A33 MIR96-201ENST00000362288 78 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 RNA5SP264-201ENST00000363115 107 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 Y_RNA.243-201ENST00000364481 109 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 RNA5SP511-201ENST00000410487 115 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 AC092423.1-201ENST00000430165 186 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 RPS20P10-201ENST00000451209 253 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 RPS29P25-201ENST00000481709 171 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 Y_RNA.670-201ENST00000516255 105 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 AC023442.1-201ENST00000531247 422 ntBASIC0.81□□□□□ -2.28
CCDC47Q96A33 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC47Q96A33 SNORD114-7-201ENST00000362520 77 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 Y_RNA.436-201ENST00000384097 102 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 Y_RNA.453-201ENST00000384223 109 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 AL035398.1-201ENST00000430869 322 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 AC093534.1-201ENST00000504977 132 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 AL353765.1-201ENST00000605514 183 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 AC023934.1-201ENST00000574529 2389 ntBASIC0.8□□□□□ -2.28
CCDC47Q96A33 MIR103A2-201ENST00000362154 78 ntBASIC0.79□□□□□ -2.28
CCDC47Q96A33 RNU6-593P-201ENST00000364716 112 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms