Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-151P-201ENST00000364158 107 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.215-201ENST00000364204 112 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.343-201ENST00000365354 112 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-969P-201ENST00000383900 105 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 SNORA20B-201ENST00000384220 132 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 SNORD14D-201ENST00000384390 87 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.488-201ENST00000384403 102 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.497-201ENST00000384447 98 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.568-201ENST00000384742 113 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 MIR526A2-201ENST00000390198 65 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 AL162725.1-201ENST00000435405 301 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 RNA5SP281-201ENST00000516504 135 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 MIR3684-201ENST00000579779 74 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 MIR4431-201ENST00000579990 94 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 MIR4753-201ENST00000585119 83 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 AC046143.2-201ENST00000609789 160 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.778-201ENST00000620203 90 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHCBP1Q8NEM2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 MIR873-201ENST00000401120 77 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 RPL30P4-201ENST00000429309 333 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 MICF-203ENST00000432679 129 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 AC245047.8-201ENST00000456455 284 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 AC026436.1-201ENST00000510537 270 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-1007P-201ENST00000516586 107 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 RNU7-121P-201ENST00000516604 62 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 AC109810.1-201ENST00000534066 224 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 MIR548AI-201ENST00000579940 88 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 snoZ196.1-201ENST00000625269 89 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 AC092881.1-201ENST00000638218 2733 ntBASIC2.75□□□□□ -1.97
SHCBP1Q8NEM2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-461P-201ENST00000364195 107 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 U8.7-201ENST00000364940 136 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-975P-201ENST00000384296 105 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 SNORD116-13-201ENST00000384408 92 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 MIR616-201ENST00000385293 97 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 HSPE1P21-201ENST00000438283 308 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 AC016717.1-201ENST00000448918 286 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 SNORD65B-201ENST00000459126 73 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-221P-201ENST00000459541 99 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-586P-201ENST00000517265 104 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
SHCBP1Q8NEM2 SNORA27.1-201ENST00000362604 124 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 SNORD31B-201ENST00000364977 69 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 MIR569-201ENST00000385228 96 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 MT-TT-201ENST00000387460 66 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-57P-201ENST00000411348 103 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 HSPE1P13-201ENST00000451143 297 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 snoU13.23-201ENST00000458863 104 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AC114982.1-201ENST00000469402 321 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AC117454.1-201ENST00000491120 168 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 RNA5SP272-201ENST00000516095 111 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 RNU7-115P-201ENST00000516433 55 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-426P-201ENST00000516464 97 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 SNORA31.15-201ENST00000516771 132 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AC022616.8-201ENST00000533569 253 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AC018630.3-201ENST00000542637 96 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 MIR548AY-201ENST00000617669 107 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AC068647.2-201ENST00000637380 353 ntBASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHCBP1Q8NEM2 AL159152.1-201ENST00000635019 2587 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 Y_RNA.229-201ENST00000364347 113 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 RNU1-138P-201ENST00000384093 164 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 MIR218-1-201ENST00000384999 110 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 RNU6-383P-201ENST00000410864 94 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AC092427.1-202ENST00000430569 476 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AC074290.1-201ENST00000448883 135 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AC090515.1-201ENST00000465295 476 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 RPS26P55-201ENST00000471178 356 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms