Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC89Q8N998 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 RNU6-1156P-201ENST00000410365 100 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC89Q8N998 AC009474.2-201ENST00000451383 136 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 ELOCP24-201ENST00000456370 334 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 SNORD79.1-201ENST00000516069 84 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 RNU6-1213P-201ENST00000517075 94 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 AC023442.1-201ENST00000531247 422 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.23□□□□□ -2.21
CCDC89Q8N998 U6atac.1-201ENST00000616025 117 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 AC027279.3-201ENST00000625055 122 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 Y_RNA.361-201ENST00000365515 120 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 RNU6-163P-201ENST00000384396 106 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 RNU6-1105P-201ENST00000384774 107 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 Y_RNA.592-201ENST00000410274 109 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 RNA5SP511-201ENST00000410487 115 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC89Q8N998 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 CYCTP-201ENST00000504253 315 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 RNU7-4P-201ENST00000516961 62 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 RNU2-12P-201ENST00000517216 168 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
CCDC89Q8N998 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC89Q8N998 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC89Q8N998 SNORD115-30-201ENST00000364117 82 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 SNORA17.3-201ENST00000391159 129 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 SNORA75.6-201ENST00000391318 127 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC89Q8N998 AL354751.2-201ENST00000415471 210 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 AL162725.1-201ENST00000435405 301 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 AC144568.1-201ENST00000520139 137 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 AC120024.3-201ENST00000603167 156 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 AC016727.1-205ENST00000605437 569 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 AC087588.2-201ENST00000617667 426 ntBASIC1.21□□□□□ -2.22
CCDC89Q8N998 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CCDC89Q8N998 SNORA7.1-201ENST00000363750 139 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 RNU4-62P-201ENST00000410125 130 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 Y_RNA.621-201ENST00000411065 96 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 FCF1P4-201ENST00000448326 183 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC89Q8N998 RNU6-1337P-201ENST00000516525 95 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 RNU6-1116P-201ENST00000517269 99 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 MTND4LP26-201ENST00000518144 282 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 AC136932.1-201ENST00000574771 208 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
CCDC89Q8N998 SNORD68-201ENST00000363214 84 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 SNORD114-24-201ENST00000365029 72 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 MIR764-201ENST00000390811 85 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 RNU4-14P-201ENST00000410858 122 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 RNU6-370P-201ENST00000411008 104 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC89Q8N998 AL163540.1-201ENST00000485382 386 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
CCDC89Q8N998 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.19□□□□□ -2.22
CCDC89Q8N998 AC004832.4-201ENST00000608952 331 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CCDC89Q8N998 TPTEP1-208ENST00000636884 213 ntBASIC1.19□□□□□ -2.22
CCDC89Q8N998 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC89Q8N998 RNU6-961P-201ENST00000363893 105 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 Y_RNA.363-201ENST00000365529 113 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 RNU6-926P-201ENST00000384075 107 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 RNU6-876P-201ENST00000391295 104 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 Y_RNA.646-201ENST00000410980 101 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC89Q8N998 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 RNU7-95P-201ENST00000459222 64 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 MTND4P17-201ENST00000470444 350 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC89Q8N998 AC092794.1-201ENST00000612734 582 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
CCDC89Q8N998 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC89Q8N998 RNU6-1188P-201ENST00000363795 107 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 RNU6-1080P-201ENST00000383982 107 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 RNU6-310P-201ENST00000384655 107 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 MIR200A-201ENST00000384875 90 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 MIR526A1-201ENST00000384897 85 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 MIR452-201ENST00000385020 85 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 MT-TL1-201ENST00000386347 75 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 RNU2-54P-201ENST00000410299 190 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 AC108210.2-201ENST00000503681 201 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 PRDX4P1-201ENST00000507189 574 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.17□□□□□ -2.22
CCDC89Q8N998 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC89Q8N998 RNY3P4-201ENST00000384428 101 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 AL031003.1-201ENST00000404229 172 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 PDCL2P1-201ENST00000419302 352 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 PIGPP3-201ENST00000425307 415 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC89Q8N998 RPS4XP11-201ENST00000446897 772 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 snoU13.23-201ENST00000458863 104 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 AC022616.4-201ENST00000522985 181 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CCDC89Q8N998 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms