Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SNORA27.1-201ENST00000362604 124 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 RNU6-199P-201ENST00000362954 107 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.267-201ENST00000364679 109 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 RNU6-593P-201ENST00000364716 112 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 U8.16-201ENST00000391279 133 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 MTCYBP10-201ENST00000424905 650 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 U8.22-201ENST00000459141 133 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 RNA5SP20-201ENST00000515976 84 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 RNU6-917P-201ENST00000516294 104 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 AC022868.1-201ENST00000517767 391 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 AC018448.1-201ENST00000552843 316 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 AC002553.4-201ENST00000616896 331 ntBASIC0.8□□□□□ -2.28
CDKL3Q8IVW4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 RNU6-424P-201ENST00000384367 105 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.498-201ENST00000384460 102 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 RNU6-376P-201ENST00000384731 106 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 MTND3P8-201ENST00000412909 339 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 UBE2V1P7-201ENST00000446395 340 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC048334.1-201ENST00000477975 159 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 OR9P1P-201ENST00000496431 281 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC105758.1-201ENST00000506038 399 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC011352.1-201ENST00000512300 793 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC074133.1-201ENST00000515696 183 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.708-201ENST00000516950 96 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 RNU6-341P-201ENST00000516973 96 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AF235103.2-201ENST00000525753 346 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC091178.2-201ENST00000584401 117 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC009229.3-201ENST00000608056 282 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.6-201ENST00000362350 114 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 SNORA1B-201ENST00000362535 133 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.358-201ENST00000365491 99 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 RNU6-601P-201ENST00000384540 107 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 MIR562-201ENST00000384894 95 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 MIR613-201ENST00000385248 95 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 MIR653-201ENST00000385279 96 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 SNORD12-201ENST00000391002 90 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC107399.1-201ENST00000451226 265 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 PCNPP5-201ENST00000452246 481 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC093850.1-201ENST00000454121 251 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 RPL7P42-201ENST00000481005 679 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 RPS26P48-201ENST00000491713 339 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 SNORA31.2-201ENST00000516019 134 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AP002004.2-201ENST00000531656 154 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC090049.2-201ENST00000550377 109 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC007014.2-201ENST00000615581 479 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 U6.115-201ENST00000636045 103 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC073869.6-201ENST00000640656 341 ntBASIC0.78□□□□□ -2.28
CDKL3Q8IVW4 AC005592.1-201ENST00000566527 1640 ntBASIC0.78□□□□□ -2.29
CDKL3Q8IVW4 MIRLET7C-201ENST00000362160 84 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 RNU4-79P-201ENST00000362764 141 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 RNU6-910P-201ENST00000390844 107 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 AC092423.1-201ENST00000430165 186 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 MTND1P34-201ENST00000438556 671 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 AL137792.2-201ENST00000443484 235 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 MTND3P10-201ENST00000450967 341 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 RNU6-625P-201ENST00000459412 107 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 AC069439.1-201ENST00000494739 167 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.655-201ENST00000515919 96 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 RNU6-947P-201ENST00000516264 106 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1291P-201ENST00000516591 104 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.77□□□□□ -2.29
CDKL3Q8IVW4 MIR410-201ENST00000362222 80 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.124-201ENST00000363339 93 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNU6-454P-201ENST00000364292 107 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.339-201ENST00000365325 102 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.404-201ENST00000383978 102 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNU6-318P-201ENST00000384283 103 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.482-201ENST00000384377 111 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 MIR873-201ENST00000401120 77 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AL451046.2-201ENST00000403074 277 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNA5SP475-201ENST00000410568 110 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AC114482.1-201ENST00000418010 247 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AC063976.4-201ENST00000421971 163 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms