Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 MIR4282-201ENST00000583613 67 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 AC104984.5-201ENST00000586878 94 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.15-201ENST00000611544 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.16-201ENST00000613119 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.12-201ENST00000613778 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.20-201ENST00000613956 192 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.9-201ENST00000615427 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.11-201ENST00000616345 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.2-201ENST00000616535 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.3-201ENST00000617785 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.19-201ENST00000618602 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 RNU2-1-201ENST00000618664 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.6-201ENST00000619225 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.5-201ENST00000619465 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 U2.10-201ENST00000620268 191 ntBASIC2.55□□□□□ -2
ATP2B3Q16720 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.82-201ENST00000363000 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.92-201ENST00000363043 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.199-201ENST00000364014 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.235-201ENST00000364412 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.306-201ENST00000365015 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.312-201ENST00000365089 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.322-201ENST00000365151 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 AC060773.1-201ENST00000421698 310 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.650-201ENST00000459002 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.638-201ENST00000459374 113 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.777-201ENST00000516982 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 AC024405.2-202ENST00000532731 184 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 MIR5002-201ENST00000584713 97 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.771-201ENST00000598668 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 Y_RNA.789-201ENST00000622480 102 ntBASIC2.54□□□□□ -2
ATP2B3Q16720 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ATP2B3Q16720 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ATP2B3Q16720 SNORA27.1-201ENST00000362604 124 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 RNU4-10P-201ENST00000364383 140 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 RNU6-923P-201ENST00000364753 107 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 RNY4P28-201ENST00000365281 93 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 RNU4-52P-201ENST00000384209 138 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 RPL23AP7-203ENST00000449021 469 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 SNORD2.1-201ENST00000458762 69 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 RNU6-1337P-201ENST00000516525 95 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 CYCSP26-201ENST00000534107 320 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.53□□□□□ -2
ATP2B3Q16720 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 Y_RNA.783-201ENST00000613546 102 ntBASIC2.53□□□□□ -2
ATP2B3Q16720 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATP2B3Q16720 AL596028.1-201ENST00000326971 197 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 MIR411-201ENST00000362239 96 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 MIRLET7G-201ENST00000362280 84 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 Y_RNA.83-201ENST00000363005 113 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 RNA5SP138-201ENST00000365098 114 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 Y_RNA.341-201ENST00000365341 102 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 RNU6-47P-201ENST00000383866 107 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 MTCO2P33-201ENST00000402100 465 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 AL357134.1-201ENST00000445848 426 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.52□□□□□ -2.01
ATP2B3Q16720 RNU6-717P-201ENST00000459076 104 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 AC022559.1-201ENST00000520905 205 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 NDUFA5P6-201ENST00000542110 379 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 MIR3124-201ENST00000582636 67 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATP2B3Q16720 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
ATP2B3Q16720 Y_RNA.308-201ENST00000365043 101 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 Y_RNA.310-201ENST00000365063 113 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 RNU6-1240P-201ENST00000365155 104 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 MIR873-201ENST00000401120 77 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.51□□□□□ -2.01
ATP2B3Q16720 RPS26P55-201ENST00000471178 356 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 RNA5SP20-201ENST00000515976 84 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 RNU6-1041P-201ENST00000516254 102 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.51□□□□□ -2.01
ATP2B3Q16720 AC009127.3-201ENST00000570531 403 ntBASIC2.51□□□□□ -2.01
ATP2B3Q16720 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATP2B3Q16720 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
ATP2B3Q16720 SNORA33-201ENST00000363664 130 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 RNU1-148P-201ENST00000384472 162 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 RNU6-136P-201ENST00000384663 107 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 RNU6-417P-201ENST00000384712 107 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 RNU6-493P-201ENST00000391321 108 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 HMGN2P34-201ENST00000437647 269 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 RPS27P22-201ENST00000478056 241 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 AC245884.12-201ENST00000615364 59 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 AC245060.5-201ENST00000610778 3293 ntBASIC2.5□□□□□ -2.01
ATP2B3Q16720 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ATP2B3Q16720 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ATP2B3Q16720 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.5□□□□□ -2.01
ATP2B3Q16720 AL159152.1-201ENST00000635019 2587 ntBASIC2.49□□□□□ -2.01
ATP2B3Q16720 Y_RNA.287-201ENST00000364853 94 ntBASIC2.49□□□□□ -2.01
ATP2B3Q16720 Y_RNA.368-201ENST00000365547 113 ntBASIC2.49□□□□□ -2.01
ATP2B3Q16720 SNORA72.4-201ENST00000384174 132 ntBASIC2.49□□□□□ -2.01
ATP2B3Q16720 SNORA40.19-201ENST00000390846 128 ntBASIC2.49□□□□□ -2.01
ATP2B3Q16720 RPS20P10-201ENST00000451209 253 ntBASIC2.49□□□□□ -2.01
ATP2B3Q16720 SNORA81.3-201ENST00000517283 198 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms