Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 RNU6-181P-201ENST00000363225 107 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 RNU6-127P-201ENST00000390897 107 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 MTCYBP4-201ENST00000401524 249 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 BX295541.1-201ENST00000417774 250 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 RPL30P16-201ENST00000419341 429 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 MTCYBP8-201ENST00000422855 651 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 MTCO1P29-201ENST00000496868 288 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AC093303.1-201ENST00000514549 295 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 RNU6-189P-201ENST00000516120 101 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 RNU6-445P-201ENST00000516949 107 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.34□□□□□ -2.46
H3F3AP84243 AL355375.2-201ENST00000574825 175 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 MIR4676-201ENST00000583078 72 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 MIR4305-201ENST00000583252 102 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AL136370.1-201ENST00000608166 691 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AF250324.2-201ENST00000608299 610 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AL391834.2-201ENST00000609982 546 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AL591926.4-201ENST00000616895 298 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 MIR6755-201ENST00000619993 66 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 AC010608.3-201ENST00000625048 527 ntBASIC-0.34□□□□□ -2.46
H3F3AP84243 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.34□□□□□ -2.46
H3F3AP84243 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.34□□□□□ -2.46
H3F3AP84243 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
H3F3AP84243 SNORD45.3-201ENST00000363836 72 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 MIR625-201ENST00000385047 85 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 RNU2-59P-201ENST00000410482 191 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.35□□□□□ -2.47
H3F3AP84243 MTCO2P11-201ENST00000431069 680 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 MTND4P32-201ENST00000437189 1237 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AC069271.1-201ENST00000445577 156 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AL033528.1-201ENST00000453780 140 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AL356010.1-201ENST00000456364 102 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.35□□□□□ -2.47
H3F3AP84243 RNU7-56P-201ENST00000458744 62 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.35□□□□□ -2.47
H3F3AP84243 MTND1P8-201ENST00000571424 950 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AC009248.2-201ENST00000619826 254 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 AC022306.3-201ENST00000619930 550 ntBASIC-0.35□□□□□ -2.47
H3F3AP84243 SNORD50.1-201ENST00000362987 71 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 RNA5SP257-201ENST00000363023 116 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 RNA5SP128-201ENST00000365305 116 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 RNU6-756P-201ENST00000383997 107 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 MT-TN-201ENST00000387400 73 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 RNU6-159P-201ENST00000391080 106 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.36□□□□□ -2.47
H3F3AP84243 SNORA18.6-201ENST00000516792 115 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.36□□□□□ -2.47
H3F3AP84243 MIR3684-201ENST00000579779 74 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 AC020891.4-201ENST00000605745 93 ntBASIC-0.36□□□□□ -2.47
H3F3AP84243 SNORA36.1-201ENST00000363424 132 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 RNU6-205P-201ENST00000390858 107 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 AL606923.1-201ENST00000406616 190 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 RNU2-54P-201ENST00000410299 190 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.37□□□□□ -2.47
H3F3AP84243 AC079354.2-201ENST00000453523 154 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.37□□□□□ -2.47
H3F3AP84243 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.37□□□□□ -2.47
H3F3AP84243 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.38□□□□□ -2.47
H3F3AP84243 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.38□□□□□ -2.47
H3F3AP84243 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.38□□□□□ -2.47
H3F3AP84243 AC008608.1-201ENST00000603910 127 ntBASIC-0.38□□□□□ -2.47
H3F3AP84243 RNU6-214P-201ENST00000384130 107 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 RNY3P9-201ENST00000384727 106 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 MIR570-201ENST00000384917 97 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 MIR329-2-201ENST00000385029 84 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 MIR214-201ENST00000385214 110 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 SNORD28B-201ENST00000390993 75 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AC073464.1-201ENST00000429823 534 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 MTCO2P16-201ENST00000436962 677 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AL353572.1-201ENST00000442490 417 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 SUMO1P2-201ENST00000452524 304 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 TPTE2P5-203ENST00000458118 728 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 SNORD45.4-201ENST00000516629 73 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 RNU6-63P-201ENST00000516690 95 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AC133485.4-201ENST00000561835 220 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AC090897.1-201ENST00000580909 226 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 PIGPP4-201ENST00000584447 307 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 MIR5692C1-201ENST00000585309 91 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AC092747.3-201ENST00000603769 301 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AP000753.3-201ENST00000604083 169 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AL121757.2-201ENST00000611223 313 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AC004223.4-201ENST00000612426 332 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 AC103705.1-201ENST00000619013 241 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.39□□□□□ -2.47
H3F3AP84243 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 RNU6-187P-201ENST00000384139 106 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 MIR938-201ENST00000401216 83 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 MIR548H2-201ENST00000408874 88 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 MLLT10P1-201ENST00000418346 262 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 Z99497.1-201ENST00000421282 135 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.4□□□□□ -2.47
H3F3AP84243 AL593851.1-201ENST00000426171 157 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms