Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MTND2P6-201ENST00000455337 1030 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AC068587.4-201ENST00000533893 186 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AC010205.1-201ENST00000616668 449 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 RNY3P13-201ENST00000365542 102 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 RNU6-535P-201ENST00000384722 107 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 MT-TY-201ENST00000387409 66 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 SNORA31.14-201ENST00000516728 116 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 MIR5591-201ENST00000578248 65 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 MIR4770-201ENST00000579149 58 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 MIR544B-201ENST00000582372 78 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 AC174048.1-201ENST00000603389 144 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 AC121247.2-201ENST00000604776 136 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 ZNF204P-201ENST00000416749 2397 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 SNORD38C-201ENST00000384381 69 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 TIMM9P2-201ENST00000419324 266 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 BTBD7P2-201ENST00000441962 620 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.66□□□□□ -2.51
PRKDCP78527 SNORD11B-201ENST00000607707 90 ntBASIC-0.66□□□□□ -2.51
PRKDCP78527 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 SNORA75B-201ENST00000384053 137 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 MIR876-201ENST00000401147 81 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 FCF1P9-201ENST00000412546 282 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 RNU7-67P-201ENST00000459003 62 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.66□□□□□ -2.52
PRKDCP78527 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.66□□□□□ -2.52
PRKDCP78527 MIR4639-201ENST00000584938 69 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 AC006380.1-201ENST00000603598 186 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.66□□□□□ -2.52
PRKDCP78527 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 AC013470.1-201ENST00000453438 462 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 AC107401.1-201ENST00000503426 685 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.66□□□□□ -2.52
PRKDCP78527 AC005609.4-201ENST00000625071 447 ntBASIC-0.66□□□□□ -2.52
PRKDCP78527 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU6-274P-201ENST00000459566 107 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC079140.5-201ENST00000507882 310 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC117522.1-201ENST00000509821 380 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.67□□□□□ -2.52
PRKDCP78527 AC087894.1-201ENST00000538359 518 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 MIR5708-201ENST00000579723 85 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 MIR3684-201ENST00000579779 74 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC008521.1-201ENST00000587471 187 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC099786.3-201ENST00000565735 1410 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU6-312P-201ENST00000364629 107 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU6-946P-201ENST00000383878 107 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 MIR215-201ENST00000384858 110 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 MIR19A-201ENST00000384878 82 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 SNORD28B-201ENST00000390993 75 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU4-30P-201ENST00000410245 143 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC244250.2-201ENST00000418731 148 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.67□□□□□ -2.52
PRKDCP78527 MTND1P31-201ENST00000449206 961 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU7-185P-201ENST00000459215 60 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 SNRPGP7-201ENST00000469016 106 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 SNORD92-201ENST00000585078 85 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 BNIP3P39-201ENST00000601077 554 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC108747.1-201ENST00000609508 535 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.67□□□□□ -2.52
PRKDCP78527 MIR1264-201ENST00000616374 69 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 MIR208B-201ENST00000401172 77 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU2-54P-201ENST00000410299 190 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 RPL23AP30-201ENST00000432419 501 ntBASIC-0.67□□□□□ -2.52
PRKDCP78527 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.67□□□□□ -2.52
PRKDCP78527 RNU6-873P-201ENST00000363833 107 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNA5SP201-201ENST00000410316 124 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 SNAP23P1-201ENST00000433229 246 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.68□□□□□ -2.52
PRKDCP78527 AC011352.1-201ENST00000512300 793 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6-341P-201ENST00000516973 96 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.68□□□□□ -2.52
PRKDCP78527 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.68□□□□□ -2.52
PRKDCP78527 DPPA3P3-201ENST00000603842 430 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 MIR4791-201ENST00000607666 84 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6-226P-201ENST00000363778 107 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6-221P-201ENST00000459541 99 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.68□□□□□ -2.52
PRKDCP78527 MIR7107-201ENST00000611489 80 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 AL078596.1-201ENST00000624856 447 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 MTND5P42-201ENST00000637720 498 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 U8.6-201ENST00000364939 135 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.68□□□□□ -2.52
PRKDCP78527 AC008536.2-201ENST00000607284 349 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 AC244669.1-204ENST00000621564 178 ntBASIC-0.68□□□□□ -2.52
PRKDCP78527 RNU6-227P-201ENST00000362865 103 ntBASIC-0.69□□□□□ -2.52
PRKDCP78527 RNU7-57P-201ENST00000459540 60 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms