Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC127459.3-201ENST00000624328 466 ntBASIC1.11□□□□□ -2.23
SRP54P61011 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
SRP54P61011 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
SRP54P61011 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
SRP54P61011 RNU6-454P-201ENST00000364292 107 ntBASIC1.1□□□□□ -2.23
SRP54P61011 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.1□□□□□ -2.23
SRP54P61011 U8.16-201ENST00000391279 133 ntBASIC1.1□□□□□ -2.23
SRP54P61011 AL451046.2-201ENST00000403074 277 ntBASIC1.1□□□□□ -2.23
SRP54P61011 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.1□□□□□ -2.23
SRP54P61011 DYNLT3P2-201ENST00000442517 295 ntBASIC1.1□□□□□ -2.23
SRP54P61011 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.1□□□□□ -2.23
SRP54P61011 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
SRP54P61011 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.1□□□□□ -2.23
SRP54P61011 Y_RNA.691-201ENST00000516611 103 ntBASIC1.1□□□□□ -2.23
SRP54P61011 AC136443.5-201ENST00000603741 370 ntBASIC1.1□□□□□ -2.23
SRP54P61011 AC080078.2-201ENST00000603766 501 ntBASIC1.1□□□□□ -2.23
SRP54P61011 RNU6-845P-201ENST00000362578 103 ntBASIC1.09□□□□□ -2.23
SRP54P61011 RNU6-1301P-201ENST00000362724 104 ntBASIC1.09□□□□□ -2.23
SRP54P61011 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
SRP54P61011 Y_RNA.224-201ENST00000364308 111 ntBASIC1.09□□□□□ -2.23
SRP54P61011 Y_RNA.243-201ENST00000364481 109 ntBASIC1.09□□□□□ -2.23
SRP54P61011 Y_RNA.279-201ENST00000364763 95 ntBASIC1.09□□□□□ -2.23
SRP54P61011 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
SRP54P61011 SNORA2.2-201ENST00000365473 135 ntBASIC1.09□□□□□ -2.23
SRP54P61011 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
SRP54P61011 SNORD12B-201ENST00000410433 91 ntBASIC1.09□□□□□ -2.23
SRP54P61011 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
SRP54P61011 AC114482.1-201ENST00000418010 247 ntBASIC1.09□□□□□ -2.23
SRP54P61011 MIR2053-201ENST00000459295 91 ntBASIC1.09□□□□□ -2.23
SRP54P61011 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.09□□□□□ -2.23
SRP54P61011 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
SRP54P61011 MIR4452-201ENST00000583004 71 ntBASIC1.09□□□□□ -2.23
SRP54P61011 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.09□□□□□ -2.23
SRP54P61011 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
SRP54P61011 MIR1244-1-201ENST00000612829 85 ntBASIC1.09□□□□□ -2.23
SRP54P61011 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.09□□□□□ -2.23
SRP54P61011 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.09□□□□□ -2.23
SRP54P61011 MIR1244-3-201ENST00000635744 85 ntBASIC1.09□□□□□ -2.23
SRP54P61011 MIR1244-2-201ENST00000636449 85 ntBASIC1.09□□□□□ -2.23
SRP54P61011 AL669831.3-213ENST00000636676 183 ntBASIC1.09□□□□□ -2.23
SRP54P61011 MIR1244-4-202ENST00000636813 85 ntBASIC1.09□□□□□ -2.23
SRP54P61011 AC005592.1-201ENST00000566527 1640 ntBASIC1.08□□□□□ -2.24
SRP54P61011 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
SRP54P61011 Y_RNA.361-201ENST00000365515 120 ntBASIC1.08□□□□□ -2.24
SRP54P61011 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
SRP54P61011 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
SRP54P61011 Y_RNA.577-201ENST00000384794 101 ntBASIC1.08□□□□□ -2.24
SRP54P61011 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.08□□□□□ -2.24
SRP54P61011 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
SRP54P61011 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
SRP54P61011 Y_RNA.635-201ENST00000459041 101 ntBASIC1.08□□□□□ -2.24
SRP54P61011 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
SRP54P61011 RNU6-917P-201ENST00000516294 104 ntBASIC1.08□□□□□ -2.24
SRP54P61011 RNU6-1291P-201ENST00000516591 104 ntBASIC1.08□□□□□ -2.24
SRP54P61011 U6atac.1-201ENST00000616025 117 ntBASIC1.08□□□□□ -2.24
SRP54P61011 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.08□□□□□ -2.24
SRP54P61011 CASC19-280ENST00000642102 1351 ntBASIC1.08□□□□□ -2.24
SRP54P61011 Y_RNA.124-201ENST00000363339 93 ntBASIC1.07□□□□□ -2.24
SRP54P61011 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
SRP54P61011 MIR625-201ENST00000385047 85 ntBASIC1.07□□□□□ -2.24
SRP54P61011 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
SRP54P61011 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.07□□□□□ -2.24
SRP54P61011 AL049830.1-201ENST00000468034 425 ntBASIC1.07□□□□□ -2.24
SRP54P61011 AC022493.2-201ENST00000506122 481 ntBASIC1.07□□□□□ -2.24
SRP54P61011 RNU7-12P-201ENST00000516030 62 ntBASIC1.07□□□□□ -2.24
SRP54P61011 RNU6-1096P-201ENST00000517089 102 ntBASIC1.07□□□□□ -2.24
SRP54P61011 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
SRP54P61011 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SRP54P61011 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SRP54P61011 RNU4-79P-201ENST00000362764 141 ntBASIC1.06□□□□□ -2.24
SRP54P61011 Y_RNA.160-201ENST00000363677 92 ntBASIC1.06□□□□□ -2.24
SRP54P61011 RNU6-99P-201ENST00000364721 107 ntBASIC1.06□□□□□ -2.24
SRP54P61011 RNU6-1080P-201ENST00000383982 107 ntBASIC1.06□□□□□ -2.24
SRP54P61011 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
SRP54P61011 MTND4P28-201ENST00000426217 387 ntBASIC1.06□□□□□ -2.24
SRP54P61011 AC245047.7-201ENST00000440265 293 ntBASIC1.06□□□□□ -2.24
SRP54P61011 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
SRP54P61011 HSPE1P13-201ENST00000451143 297 ntBASIC1.06□□□□□ -2.24
SRP54P61011 AC098679.4-201ENST00000624241 654 ntBASIC1.06□□□□□ -2.24
SRP54P61011 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SRP54P61011 MIRLET7C-201ENST00000362160 84 ntBASIC1.05□□□□□ -2.24
SRP54P61011 Y_RNA.116-201ENST00000363292 103 ntBASIC1.05□□□□□ -2.24
SRP54P61011 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
SRP54P61011 SNORA69.1-201ENST00000390904 137 ntBASIC1.05□□□□□ -2.24
SRP54P61011 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.05□□□□□ -2.24
SRP54P61011 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.05□□□□□ -2.24
SRP54P61011 RPL39P39-201ENST00000455840 151 ntBASIC1.05□□□□□ -2.24
SRP54P61011 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.05□□□□□ -2.24
SRP54P61011 SNORA70.12-201ENST00000516084 153 ntBASIC1.05□□□□□ -2.24
SRP54P61011 RNU6-1213P-201ENST00000517075 94 ntBASIC1.05□□□□□ -2.24
SRP54P61011 RNU6-264P-201ENST00000517134 104 ntBASIC1.05□□□□□ -2.24
SRP54P61011 RNU2-12P-201ENST00000517216 168 ntBASIC1.05□□□□□ -2.24
SRP54P61011 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.05□□□□□ -2.24
SRP54P61011 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.05□□□□□ -2.24
SRP54P61011 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
SRP54P61011 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
SRP54P61011 RNU6-910P-201ENST00000390844 107 ntBASIC1.04□□□□□ -2.24
SRP54P61011 SNORA75.6-201ENST00000391318 127 ntBASIC1.04□□□□□ -2.24
SRP54P61011 Y_RNA.592-201ENST00000410274 109 ntBASIC1.04□□□□□ -2.24
SRP54P61011 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms