Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNA5SP59-201ENST00000410922 110 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 AL135786.1-201ENST00000415892 214 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 HSPE1P21-201ENST00000438283 308 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.17□□□□□ -2.06
SUMO3P55854 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.17□□□□□ -2.06
SUMO3P55854 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 RNU7-116P-201ENST00000516940 62 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 AL162424.1-201ENST00000602325 221 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 AC068647.2-201ENST00000637380 353 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 AC080100.1-201ENST00000624239 5356 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SUMO3P55854 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SUMO3P55854 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SUMO3P55854 Y_RNA.20-201ENST00000362479 113 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 RNU6-1272P-201ENST00000362776 107 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 Y_RNA.188-201ENST00000363952 111 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 SNORA25.6-201ENST00000364121 118 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 RNU6-1289P-201ENST00000384431 106 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 MIR144-201ENST00000384886 86 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 RNU6-763P-201ENST00000390865 106 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 AL355497.1-201ENST00000406262 551 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 Y_RNA.637-201ENST00000459424 114 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 TRBV12-1-201ENST00000479785 344 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 MTND1P19-201ENST00000511780 315 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 RNU6-1023P-201ENST00000516137 106 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 RNU6-341P-201ENST00000516973 96 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 MIR3128-201ENST00000581957 66 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 AC006006.1-201ENST00000603082 144 ntBASIC2.16□□□□□ -2.06
SUMO3P55854 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SUMO3P55854 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.82-201ENST00000363000 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.92-201ENST00000363043 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 RNU6-899P-201ENST00000363947 107 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.235-201ENST00000364412 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.306-201ENST00000365015 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.312-201ENST00000365089 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.322-201ENST00000365151 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.489-201ENST00000384410 101 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 RNU6-296P-201ENST00000384608 107 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SUMO3P55854 SNORA26.5-201ENST00000391215 123 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AC104332.1-201ENST00000440471 797 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 RPS27P1-201ENST00000450552 247 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.650-201ENST00000459002 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AC091021.1-201ENST00000468051 388 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
SUMO3P55854 RNU7-115P-201ENST00000516433 55 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.777-201ENST00000516982 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 IGLV3-17-201ENST00000519099 244 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AL358944.1-201ENST00000528537 144 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.771-201ENST00000598668 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AC022217.4-201ENST00000604389 163 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AP003357.1-201ENST00000604497 148 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AC010900.2-201ENST00000604508 210 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 AL773524.1-201ENST00000614065 229 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.789-201ENST00000622480 102 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 snoU18.1-201ENST00000629629 71 ntBASIC2.15□□□□□ -2.07
SUMO3P55854 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.15□□□□□ -2.07
SUMO3P55854 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.07
SUMO3P55854 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SUMO3P55854 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.15□□□□□ -2.07
SUMO3P55854 Y_RNA.54-201ENST00000362766 105 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 Y_RNA.277-201ENST00000364754 102 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 SNORA20.1-201ENST00000364790 130 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 U8.7-201ENST00000364940 136 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 Y_RNA.477-201ENST00000384352 108 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 SNORD58.1-201ENST00000391313 66 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 RNU2-14P-201ENST00000411053 191 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 RPS4XP11-201ENST00000446897 772 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.14□□□□□ -2.07
SUMO3P55854 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.14□□□□□ -2.07
SUMO3P55854 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.14□□□□□ -2.07
SUMO3P55854 Y_RNA.673-201ENST00000516306 88 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 Y_RNA.680-201ENST00000516441 93 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 RNU6-1096P-201ENST00000517089 102 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.14□□□□□ -2.07
SUMO3P55854 POLR3GP1-201ENST00000594073 261 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.14□□□□□ -2.07
SUMO3P55854 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
SUMO3P55854 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
SUMO3P55854 AC131280.1-202ENST00000624067 4211 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 Y_RNA.117-201ENST00000363294 101 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 SNORA72-201ENST00000384339 132 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 SNORA67.4-201ENST00000384688 142 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 RNU2-7P-201ENST00000410794 178 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 AC009310.1-201ENST00000414414 451 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 RNU7-141P-201ENST00000459304 62 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 AC117454.1-201ENST00000491120 168 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 RNA5SP481-201ENST00000516814 122 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 RNU6-1271P-201ENST00000517049 105 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 MIR4282-201ENST00000583613 67 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 MIR548AY-201ENST00000617669 107 ntBASIC2.13□□□□□ -2.07
SUMO3P55854 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms