Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU7-172P-201ENST00000517125 64 ntBASIC1.28□□□□□ -2.2
TRIM23P36406 AL929325.1-201ENST00000603096 117 ntBASIC1.28□□□□□ -2.2
TRIM23P36406 AC021506.2-201ENST00000612354 169 ntBASIC1.28□□□□□ -2.2
TRIM23P36406 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
TRIM23P36406 AL513423.1-201ENST00000621695 132 ntBASIC1.28□□□□□ -2.2
TRIM23P36406 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.28□□□□□ -2.2
TRIM23P36406 Y_RNA.187-201ENST00000363918 113 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 Y_RNA.303-201ENST00000364998 94 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 MIR499A-201ENST00000384903 122 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 MIR513A1-201ENST00000385138 129 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM23P36406 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM23P36406 AC005002.2-201ENST00000438228 269 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 AL137792.2-201ENST00000443484 235 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM23P36406 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 RNU6-1278P-201ENST00000516130 107 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 AL358944.1-201ENST00000528537 144 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 RAB11AP2-201ENST00000545905 639 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM23P36406 AC040896.1-201ENST00000613819 479 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 MIR6079-201ENST00000635807 62 ntBASIC1.27□□□□□ -2.21
TRIM23P36406 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM23P36406 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM23P36406 Y_RNA.122-201ENST00000363331 96 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 RNU6-454P-201ENST00000364292 107 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 MIR518E-201ENST00000385252 88 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 SNORD78.2-201ENST00000391076 69 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 Y_RNA.605-201ENST00000410577 105 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.26□□□□□ -2.21
TRIM23P36406 AC018865.2-201ENST00000423631 129 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 AC236972.2-201ENST00000434979 310 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 SNORA70.12-201ENST00000516084 153 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 Y_RNA.702-201ENST00000516843 96 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 RNU6-341P-201ENST00000516973 96 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 RNU2-12P-201ENST00000517216 168 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 AP002001.1-203ENST00000534002 267 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 AC023157.2-201ENST00000540596 141 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM23P36406 MIR548S-201ENST00000581352 82 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 U2.1-201ENST00000618978 145 ntBASIC1.26□□□□□ -2.21
TRIM23P36406 Y_RNA.27-201ENST00000362540 103 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 RNA5SP259-201ENST00000365541 109 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 MIR520G-201ENST00000385064 90 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 HSPE1P13-201ENST00000451143 297 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 SNORD19B-201ENST00000459623 84 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 RNU6-120P-201ENST00000516077 103 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 RNU6-1012P-201ENST00000516606 109 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.25□□□□□ -2.21
TRIM23P36406 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 AL355375.2-201ENST00000574825 175 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 AP001094.1-201ENST00000579805 193 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 AC091178.2-201ENST00000584401 117 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 AL138825.1-201ENST00000618587 192 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 AC138305.3-201ENST00000624988 240 ntBASIC1.25□□□□□ -2.21
TRIM23P36406 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM23P36406 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
TRIM23P36406 Y_RNA.230-201ENST00000364348 109 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 RNU6-117P-201ENST00000365415 107 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 Y_RNA.508-201ENST00000384502 114 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.24□□□□□ -2.21
TRIM23P36406 RPL30P7-201ENST00000479312 323 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 AC105758.1-201ENST00000506038 399 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 RNU6-408P-201ENST00000515910 100 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 VN1R91P-201ENST00000594377 169 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 MIR8070-201ENST00000616510 88 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 AC073349.3-201ENST00000617616 186 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 AC091925.1-201ENST00000623204 462 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 AC127459.3-201ENST00000624328 466 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
TRIM23P36406 MTND4LP32-201ENST00000636111 270 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
TRIM23P36406 Y_RNA.314-201ENST00000365114 102 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 RNU6-407P-201ENST00000365280 104 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 RNU1-115P-201ENST00000365329 160 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 Y_RNA.428-201ENST00000384078 102 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 Y_RNA.463-201ENST00000384271 102 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 MIR628-201ENST00000385229 95 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 MT-TD-201ENST00000387419 68 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM23P36406 MRPS18CP6-201ENST00000423587 223 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 Y_RNA.632-201ENST00000459189 102 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 snoU13.18-201ENST00000459483 104 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM23P36406 AC027419.1-201ENST00000522976 328 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM23P36406 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
TRIM23P36406 AP002004.2-201ENST00000531656 154 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 AC006380.1-201ENST00000603598 186 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 AL365434.2-201ENST00000607979 234 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.23□□□□□ -2.21
TRIM23P36406 Y_RNA.146-201ENST00000363549 102 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 SNORD115-30-201ENST00000364117 82 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 RNU2-54P-201ENST00000410299 190 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms