Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AP002004.2-201ENST00000531656 154 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 AC127459.3-201ENST00000624328 466 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
PTPN6P29350 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PTPN6P29350 RNU6-1301P-201ENST00000362724 104 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.166-201ENST00000363730 102 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.796-201ENST00000364268 102 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.248-201ENST00000364501 109 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.799-201ENST00000364992 102 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.355-201ENST00000365462 98 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.09□□□□□ -2.23
PTPN6P29350 RNU6-424P-201ENST00000384367 105 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 MIR625-201ENST00000385047 85 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.619-201ENST00000410951 90 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 DYNLT3P2-201ENST00000442517 295 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.09□□□□□ -2.23
PTPN6P29350 RNU6-1291P-201ENST00000516591 104 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 Y_RNA.691-201ENST00000516611 103 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 AP002001.1-203ENST00000534002 267 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 AC091178.2-201ENST00000584401 117 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
PTPN6P29350 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.09□□□□□ -2.24
PTPN6P29350 SNORA1B-201ENST00000362535 133 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 Y_RNA.118-201ENST00000363300 101 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 Y_RNA.122-201ENST00000363331 96 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 RNU6-454P-201ENST00000364292 107 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 SNORA25-201ENST00000384384 134 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 MT-TL1-201ENST00000386347 75 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 SNORA69.1-201ENST00000390904 137 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 U8.16-201ENST00000391279 133 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 RNU4-14P-201ENST00000410858 122 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 RNU6-370P-201ENST00000411008 104 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.08□□□□□ -2.24
PTPN6P29350 AC233266.1-201ENST00000454518 96 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 OR9P1P-201ENST00000496431 281 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 SNORD116-28-201ENST00000516123 91 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 RNU6-165P-201ENST00000517170 99 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.08□□□□□ -2.24
PTPN6P29350 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
PTPN6P29350 GHRLOS.1-201ENST00000610995 70 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 AC242852.1-201ENST00000612151 96 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 MIR7111-201ENST00000619751 72 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 AC244015.1-201ENST00000622301 99 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 TPTEP1-208ENST00000636884 213 ntBASIC1.08□□□□□ -2.24
PTPN6P29350 Y_RNA.124-201ENST00000363339 93 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 Y_RNA.577-201ENST00000384794 101 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 MIR520G-201ENST00000385064 90 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
PTPN6P29350 RNA5SP482-201ENST00000391269 118 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 MTND4P28-201ENST00000426217 387 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.07□□□□□ -2.24
PTPN6P29350 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 RNU6-408P-201ENST00000515910 100 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 RNU6-322P-201ENST00000516010 103 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 RNU7-12P-201ENST00000516030 62 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.07□□□□□ -2.24
PTPN6P29350 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 MIR5690-201ENST00000583739 73 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 AC080078.3-201ENST00000605407 463 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
PTPN6P29350 AC005592.1-201ENST00000566527 1640 ntBASIC1.07□□□□□ -2.24
PTPN6P29350 RNU6-136P-201ENST00000384663 107 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AL451046.2-201ENST00000403074 277 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 RNU6-1156P-201ENST00000410365 100 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 PDCL2P1-201ENST00000419302 352 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 MTND1P2-201ENST00000430604 821 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 HSPE1P13-201ENST00000451143 297 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AL049830.1-201ENST00000468034 425 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AC105758.1-201ENST00000506038 399 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AC022493.2-201ENST00000506122 481 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 RNU6-120P-201ENST00000516077 103 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AC005828.6-201ENST00000606610 232 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
PTPN6P29350 Y_RNA.243-201ENST00000364481 109 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 SNORD81.2-201ENST00000365153 76 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 SNORA75.6-201ENST00000391318 127 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 Y_RNA.592-201ENST00000410274 109 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 Y_RNA.646-201ENST00000410980 101 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.05□□□□□ -2.24
PTPN6P29350 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
PTPN6P29350 RNU6-947P-201ENST00000516264 106 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 RNU6-1096P-201ENST00000517089 102 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 AC023442.1-201ENST00000531247 422 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.05□□□□□ -2.24
PTPN6P29350 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 AC136443.5-201ENST00000603741 370 ntBASIC1.05□□□□□ -2.24
PTPN6P29350 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms