Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 Y_RNA.243-201ENST00000364481 109 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 RNU6-99P-201ENST00000364721 107 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 SNORD81.2-201ENST00000365153 76 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 MIR499A-201ENST00000384903 122 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 MIR520G-201ENST00000385064 90 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 RNA5SP482-201ENST00000391269 118 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.08□□□□□ -2.24
XRCC1P18887 AC144568.1-201ENST00000520139 137 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.08□□□□□ -2.24
XRCC1P18887 AC091178.2-201ENST00000584401 117 ntBASIC1.08□□□□□ -2.24
XRCC1P18887 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
XRCC1P18887 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
XRCC1P18887 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
XRCC1P18887 RNU6-199P-201ENST00000362954 107 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 RNU6-1188P-201ENST00000363795 107 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 RNU6-1156P-201ENST00000410365 100 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 RNU6-370P-201ENST00000411008 104 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.07□□□□□ -2.24
XRCC1P18887 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.07□□□□□ -2.24
XRCC1P18887 AC091021.1-201ENST00000468051 388 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
XRCC1P18887 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
XRCC1P18887 RNU6-454P-201ENST00000364292 107 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 RNU6-424P-201ENST00000384367 105 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 RNU6-505P-201ENST00000384427 107 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 MIR653-201ENST00000385279 96 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 Y_RNA.592-201ENST00000410274 109 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 RNU4-14P-201ENST00000410858 122 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
XRCC1P18887 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
XRCC1P18887 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.06□□□□□ -2.24
XRCC1P18887 RNA5SP168-201ENST00000516642 112 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 RNU6-1213P-201ENST00000517075 94 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 AC133104.2-201ENST00000615272 193 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.06□□□□□ -2.24
XRCC1P18887 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
XRCC1P18887 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 Y_RNA.267-201ENST00000364679 109 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 RNU6-117P-201ENST00000365415 107 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 RNU6-310P-201ENST00000384655 107 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 MIR1287-201ENST00000408492 90 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 Y_RNA.646-201ENST00000410980 101 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 RNU5A-5P-201ENST00000411054 116 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AC098614.3-201ENST00000438957 440 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 OR9P1P-201ENST00000496431 281 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AC022493.2-201ENST00000506122 481 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 PRDX4P1-201ENST00000507189 574 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 RNU6-322P-201ENST00000516010 103 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 SNORA70.12-201ENST00000516084 153 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AP002001.1-203ENST00000534002 267 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AC113139.1-201ENST00000605049 239 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 GHRLOS.1-201ENST00000610995 70 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 AC087588.2-201ENST00000617667 426 ntBASIC1.05□□□□□ -2.24
XRCC1P18887 SNORA1B-201ENST00000362535 133 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 Y_RNA.361-201ENST00000365515 120 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 AL049830.1-201ENST00000468034 425 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 MTND4P17-201ENST00000470444 350 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 AC082651.2-201ENST00000496833 166 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
XRCC1P18887 RNU6-408P-201ENST00000515910 100 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 RNU6-470P-201ENST00000515954 104 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.04□□□□□ -2.24
XRCC1P18887 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.04□□□□□ -2.24
XRCC1P18887 AC006380.1-201ENST00000603598 186 ntBASIC1.04□□□□□ -2.24
XRCC1P18887 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
XRCC1P18887 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.03□□□□□ -2.24
XRCC1P18887 RNU6-1080P-201ENST00000383982 107 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 RNY3P4-201ENST00000384428 101 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 U8.16-201ENST00000391279 133 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 AC138393.2-201ENST00000414742 246 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 CALM2P4-201ENST00000430810 426 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 FCF1P4-201ENST00000448326 183 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 HSPE1P13-201ENST00000451143 297 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 Y_RNA.653-201ENST00000459091 95 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 SNORA20.3-201ENST00000516880 132 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.03□□□□□ -2.24
XRCC1P18887 MIR4778-201ENST00000577635 80 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 AC136443.5-201ENST00000603741 370 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 AC106754.2-201ENST00000623006 233 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 AC099654.14-201ENST00000638599 341 ntBASIC1.03□□□□□ -2.24
XRCC1P18887 RNU6-890P-201ENST00000384121 107 ntBASIC1.02□□□□□ -2.25
XRCC1P18887 Y_RNA.474-201ENST00000384341 102 ntBASIC1.02□□□□□ -2.25
XRCC1P18887 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
XRCC1P18887 AL451046.2-201ENST00000403074 277 ntBASIC1.02□□□□□ -2.25
XRCC1P18887 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms