Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.06□□□□□ -2.4
HLA-DQB2P05538 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 RNA5SP62-201ENST00000363457 110 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 RNU6-1264P-201ENST00000383891 107 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 MIR15B-201ENST00000385045 98 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 MIR514A2-201ENST00000385131 88 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 MIR514A3-201ENST00000385132 88 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 RNU6-613P-201ENST00000410412 108 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 AL390729.2-201ENST00000416137 156 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 AC005534.2-201ENST00000431047 433 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 MTND1P4-201ENST00000435196 415 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 AC134698.4-201ENST00000523451 826 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
HLA-DQB2P05538 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
HLA-DQB2P05538 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.04□□□□□ -2.4
HLA-DQB2P05538 Y_RNA.168-201ENST00000363740 102 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 MIR520H-201ENST00000385126 88 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 Y_RNA.621-201ENST00000411065 96 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.04□□□□□ -2.4
HLA-DQB2P05538 RNU6-63P-201ENST00000516690 95 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 MIR4528-201ENST00000577763 90 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 AC005828.6-201ENST00000606610 232 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.04□□□□□ -2.4
HLA-DQB2P05538 RNU6-222P-201ENST00000362438 107 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 Y_RNA.169-201ENST00000363745 96 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 RNU6-522P-201ENST00000364497 107 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 RNU6-128P-201ENST00000383976 107 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 MIR873-201ENST00000401120 77 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 SNORD83.1-201ENST00000411362 77 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AL445567.1-201ENST00000439121 144 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 PCMTD1P1-201ENST00000455560 355 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AC022523.2-201ENST00000561045 150 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.03□□□□□ -2.4
HLA-DQB2P05538 MIR5696-201ENST00000578474 85 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 MIR3612-201ENST00000579753 87 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 POLR3GP2-201ENST00000588366 668 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AC011712.1-201ENST00000588959 234 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AF250324.2-201ENST00000608299 610 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AL355073.2-201ENST00000612106 557 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 AL591926.4-201ENST00000616895 298 ntBASIC0.03□□□□□ -2.4
HLA-DQB2P05538 RNU6-281P-201ENST00000384212 103 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 MIR520F-201ENST00000384824 87 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 MIR518A1-201ENST00000385068 85 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 RNU6-679P-201ENST00000391003 106 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 ELOCP21-201ENST00000412558 336 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 MTATP6P19-201ENST00000413797 659 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.02□□□□□ -2.41
HLA-DQB2P05538 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.02□□□□□ -2.41
HLA-DQB2P05538 SNORD123-201ENST00000459473 70 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.02□□□□□ -2.41
HLA-DQB2P05538 SNORA25.12-201ENST00000516202 82 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.02□□□□□ -2.41
HLA-DQB2P05538 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 AL050303.3-201ENST00000613704 284 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 AC091925.1-201ENST00000623204 462 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 MIR4251-201ENST00000635819 61 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 AC099654.12-201ENST00000639868 649 ntBASIC0.02□□□□□ -2.41
HLA-DQB2P05538 Y_RNA.1-201ENST00000352915 104 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 Y_RNA.112-201ENST00000363250 102 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 RNU6-95P-201ENST00000384697 107 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.01□□□□□ -2.41
HLA-DQB2P05538 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.01□□□□□ -2.41
HLA-DQB2P05538 MTND3P16-201ENST00000452205 344 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 MTND1P11-201ENST00000456661 876 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AC083798.1-201ENST00000472671 131 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AC083904.1-201ENST00000487828 231 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.01□□□□□ -2.41
HLA-DQB2P05538 RNU6-1114P-201ENST00000516022 107 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 MTATP6P24-201ENST00000576835 677 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AP001330.5-201ENST00000607176 411 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AC078938.1-201ENST00000620993 318 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 AC091931.1-201ENST00000623488 728 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 U6.115-201ENST00000636045 103 ntBASIC0.01□□□□□ -2.41
HLA-DQB2P05538 MIR410-201ENST00000362222 80 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 RNU6-254P-201ENST00000363377 107 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 SNORA72.3-201ENST00000365074 132 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 Y_RNA.476-201ENST00000384347 108 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 MIR193B-201ENST00000384907 83 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0□□□□□ -2.41
HLA-DQB2P05538 snoU13.21-201ENST00000459368 105 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 RNU6-261P-201ENST00000459506 102 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 MIR2115-201ENST00000516657 100 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 MTND2P38-201ENST00000522536 667 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 RBM11P1-201ENST00000604951 799 ntBASIC0□□□□□ -2.41
HLA-DQB2P05538 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0□□□□□ -2.41
HLA-DQB2P05538 RNA5SP517-201ENST00000364724 117 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 SNORD71-201ENST00000411292 86 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AL354751.2-201ENST00000415471 210 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AL590632.1-201ENST00000424289 371 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AC015818.7-201ENST00000428754 109 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AC087499.7-201ENST00000441958 109 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 UQCRBP2-201ENST00000447827 297 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 ACA59.1-201ENST00000515966 143 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms