Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MIR578-201ENST00000384828 96 ntBASIC-1.35□□□□□ -2.62
POLR1AO95602 MIR215-201ENST00000384858 110 ntBASIC-1.35□□□□□ -2.62
POLR1AO95602 PRDX4P1-201ENST00000507189 574 ntBASIC-1.35□□□□□ -2.62
POLR1AO95602 AC084368.1-201ENST00000620935 65 ntBASIC-1.35□□□□□ -2.62
POLR1AO95602 AL078596.1-201ENST00000624856 447 ntBASIC-1.35□□□□□ -2.62
POLR1AO95602 RNY4P7-201ENST00000364600 96 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 RPS29P13-201ENST00000402041 169 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.35□□□□□ -2.63
POLR1AO95602 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.35□□□□□ -2.63
POLR1AO95602 AC109479.2-201ENST00000517842 174 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 MIR4752-201ENST00000579672 72 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 OR4H6P-202ENST00000603819 340 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 AL359999.1-201ENST00000604513 294 ntBASIC-1.35□□□□□ -2.63
POLR1AO95602 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 RNU6-47P-201ENST00000383866 107 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 ELOCP17-201ENST00000414751 326 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 TIMM9P2-201ENST00000419324 266 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 BTBD7P2-201ENST00000441962 620 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.36□□□□□ -2.63
POLR1AO95602 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.36□□□□□ -2.63
POLR1AO95602 FGF7P1-201ENST00000582820 288 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 AC011458.1-201ENST00000604034 617 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 AP000907.4-201ENST00000604143 237 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.36□□□□□ -2.63
POLR1AO95602 AC010205.1-201ENST00000616668 449 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 AC005562.2-201ENST00000618264 111 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 AC244669.1-204ENST00000621564 178 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 AL162376.1-201ENST00000624117 175 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.36□□□□□ -2.63
POLR1AO95602 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.36□□□□□ -2.63
POLR1AO95602 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 RNY3P13-201ENST00000365542 102 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 SNORA26.5-201ENST00000391215 123 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 HLA-S-202ENST00000425174 53 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 RNU7-73P-201ENST00000458743 63 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 SNORD123-201ENST00000459473 70 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.37□□□□□ -2.63
POLR1AO95602 AC091133.4-201ENST00000511142 308 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 RNU6-504P-201ENST00000516568 104 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 RNA5SP33-201ENST00000516687 98 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 MIR378D2-201ENST00000580636 98 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 AC008521.1-201ENST00000587471 187 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 AC022306.2-201ENST00000617563 647 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 RNU6-721P-201ENST00000410155 105 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.37□□□□□ -2.63
POLR1AO95602 AL358934.1-201ENST00000432346 324 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.37□□□□□ -2.63
POLR1AO95602 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
POLR1AO95602 AC120024.3-201ENST00000603167 156 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 MTATP6P2-201ENST00000603319 678 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 AC108747.1-201ENST00000609508 535 ntBASIC-1.37□□□□□ -2.63
POLR1AO95602 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.37□□□□□ -2.63
POLR1AO95602 U6.112-201ENST00000384129 70 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 SNORD65.1-201ENST00000390889 71 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 AL590623.1-201ENST00000427864 105 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 MTCO3P8-201ENST00000453691 755 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 RPL23AP75-201ENST00000491601 451 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 MTND3P25-201ENST00000509243 135 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.38□□□□□ -2.63
POLR1AO95602 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 MIR4789-201ENST00000577469 82 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 MIR4280-201ENST00000582178 76 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 AC016597.2-201ENST00000613256 341 ntBASIC-1.38□□□□□ -2.63
POLR1AO95602 RNU4-66P-201ENST00000365199 138 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 MIR15B-201ENST00000385045 98 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 SNAP23P1-201ENST00000433229 246 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 SUMO1P3-201ENST00000439961 304 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.39□□□□□ -2.63
POLR1AO95602 RNU6-150P-201ENST00000516237 95 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 MIR3912-201ENST00000577566 105 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 MIR544B-201ENST00000582372 78 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 AC010608.3-201ENST00000625048 527 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 MIR1246-201ENST00000636535 73 ntBASIC-1.39□□□□□ -2.63
POLR1AO95602 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 MIR320C1-201ENST00000408566 88 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 RNU6-607P-201ENST00000411283 108 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AC092447.3-201ENST00000426027 686 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 RNU7-182P-201ENST00000459009 62 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.4□□□□□ -2.63
POLR1AO95602 AL358944.1-201ENST00000528537 144 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AC026470.2-201ENST00000561492 181 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 MIR4639-201ENST00000584938 69 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AL445435.1-201ENST00000604232 665 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 RNU6-481P-201ENST00000384194 107 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 USP9YP16-201ENST00000430287 407 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.4□□□□□ -2.63
POLR1AO95602 SNORA13-201ENST00000458790 133 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms