Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RNA5SP20-201ENST00000515976 84 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 AC007751.1-201ENST00000529260 376 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 AL137161.1-201ENST00000532231 390 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 MIR8076-201ENST00000611401 83 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 SNORD73A-201ENST00000386062 65 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 SNORA75.6-201ENST00000391318 127 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.36□□□□□ -2.47
PCF11O94913 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.36□□□□□ -2.47
PCF11O94913 AC107401.1-201ENST00000503426 685 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 SNORA18.7-201ENST00000516910 131 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 MIR548AO-201ENST00000579992 96 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 MIR4743-201ENST00000584576 69 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 AC087683.1-201ENST00000591187 441 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 AC104260.1-201ENST00000616660 539 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 RNU6-580P-201ENST00000365159 107 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 MIR643-201ENST00000385267 97 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 MRPS10P2-201ENST00000431226 381 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 MTND1P26-201ENST00000440488 538 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 RNU7-56P-201ENST00000458744 62 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 AL157392.4-201ENST00000609756 345 ntBASIC-0.36□□□□□ -2.47
PCF11O94913 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 RNY4P34-201ENST00000364779 95 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 RNU6-541P-201ENST00000384709 110 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 MIR892B-201ENST00000401279 77 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.37□□□□□ -2.47
PCF11O94913 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 AK6P2-201ENST00000549020 471 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 SCOCP1-201ENST00000554676 349 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 RPL23AP91-201ENST00000569211 455 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.37□□□□□ -2.47
PCF11O94913 MIR4804-201ENST00000581683 73 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 MIR4251-201ENST00000635819 61 ntBASIC-0.37□□□□□ -2.47
PCF11O94913 RNU6-369P-201ENST00000362515 102 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 SNORD68-201ENST00000363214 84 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 RNU6-606P-201ENST00000384721 111 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 MIR145-201ENST00000384967 88 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 MIR1302-7-201ENST00000408841 72 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 AC096531.1-201ENST00000419107 107 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.38□□□□□ -2.47
PCF11O94913 AC091951.3-201ENST00000504093 246 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 RNA5SP94-201ENST00000516917 108 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 AL355375.2-201ENST00000574825 175 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 AC087685.1-201ENST00000587507 141 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 AC092447.9-201ENST00000603395 144 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 MIR7844-201ENST00000616161 122 ntBASIC-0.38□□□□□ -2.47
PCF11O94913 SNORD114-3-201ENST00000364969 75 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 MIR106A-201ENST00000384870 81 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 RNU6-848P-201ENST00000515948 107 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 RNU6-617P-201ENST00000516147 107 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 RNU6-473P-201ENST00000516164 107 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.39□□□□□ -2.47
PCF11O94913 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.39□□□□□ -2.47
PCF11O94913 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
PCF11O94913 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 MIR516B2-201ENST00000385190 85 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AL353997.1-201ENST00000432936 108 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.4□□□□□ -2.47
PCF11O94913 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.4□□□□□ -2.47
PCF11O94913 RN7SKP287-201ENST00000516546 266 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.4□□□□□ -2.47
PCF11O94913 MTND1P8-201ENST00000571424 950 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AC006157.1-201ENST00000611750 366 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AC006504.8-201ENST00000621046 635 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 SNORA20B-201ENST00000384220 132 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 SNORA8.2-201ENST00000384372 139 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 MIR593-201ENST00000384856 100 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 MT-TN-201ENST00000387400 73 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 RNU6-747P-201ENST00000390928 104 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 RNU6-241P-201ENST00000391148 104 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 SNORD100-201ENST00000408573 76 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 MTND4P19-201ENST00000446659 478 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 ZNF114P1-201ENST00000453500 292 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.4□□□□□ -2.47
PCF11O94913 SNORD4A-201ENST00000459174 72 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AC012433.1-201ENST00000588916 398 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 SNORA25.18-201ENST00000607153 114 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 AC064836.2-201ENST00000609491 462 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
PCF11O94913 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.41□□□□□ -2.47
PCF11O94913 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.41□□□□□ -2.47
PCF11O94913 RNU6-500P-201ENST00000362349 107 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 SNORD114-12-201ENST00000365400 75 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 RNU6-756P-201ENST00000383997 107 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 RNU6-929P-201ENST00000384429 107 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 RNU6-906P-201ENST00000384700 70 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 RNU6-903P-201ENST00000391270 109 ntBASIC-0.41□□□□□ -2.48
PCF11O94913 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.41□□□□□ -2.48
PCF11O94913 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms