Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU2-16P-201ENST00000410712 136 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
CLOCKO15516 MTATP6P17-201ENST00000431030 672 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 AC233266.1-201ENST00000454518 96 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.62□□□□□ -2.31
CLOCKO15516 RNU6-1116P-201ENST00000517269 99 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 AC022868.1-201ENST00000517767 391 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.62□□□□□ -2.31
CLOCKO15516 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.62□□□□□ -2.31
CLOCKO15516 MIR3192-201ENST00000584920 77 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 MIR3942-201ENST00000585264 109 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 AC012557.2-201ENST00000605919 418 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 AC104465.1-201ENST00000611365 139 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 AC242852.1-201ENST00000612151 96 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 AC244015.1-201ENST00000622301 99 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 MTND5P16-201ENST00000460269 1703 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 Y_RNA.51-201ENST00000362725 102 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 RNU4-12P-201ENST00000365233 139 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 RNU6-117P-201ENST00000365415 107 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 EIF1P2-201ENST00000428233 350 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.61□□□□□ -2.31
CLOCKO15516 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 AC074133.1-201ENST00000515696 183 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 AC125232.2-201ENST00000592457 143 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 AC027279.3-201ENST00000625055 122 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 U6.115-201ENST00000636045 103 ntBASIC0.61□□□□□ -2.31
CLOCKO15516 MIR410-201ENST00000362222 80 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 RNA5SP264-201ENST00000363115 107 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 Y_RNA.336-201ENST00000365307 109 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 RNU6-1145P-201ENST00000384246 107 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 SNORD116-1-201ENST00000384335 95 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 MIR216A-201ENST00000385063 110 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 MIR873-201ENST00000401120 77 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 RNU6-373P-201ENST00000411247 98 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.6□□□□□ -2.31
CLOCKO15516 AC093019.1-201ENST00000443135 252 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.6□□□□□ -2.31
CLOCKO15516 CYCTP-201ENST00000504253 315 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 RNU6-1096P-201ENST00000517089 102 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 AC026407.1-201ENST00000518369 204 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.6□□□□□ -2.31
CLOCKO15516 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.6□□□□□ -2.31
CLOCKO15516 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 AC024614.3-201ENST00000637860 256 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.6□□□□□ -2.31
CLOCKO15516 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.6□□□□□ -2.31
CLOCKO15516 RNU6-1059P-201ENST00000363752 98 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 RNU6-163P-201ENST00000384396 106 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 USP9YP30-201ENST00000430729 455 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.59□□□□□ -2.31
CLOCKO15516 MTND4LP16-201ENST00000440828 295 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 PCNPP5-201ENST00000452246 481 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC113410.1-201ENST00000505029 247 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 RNU6-864P-201ENST00000516256 108 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 RNU1-54P-201ENST00000517181 120 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC004812.1-201ENST00000540773 146 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.59□□□□□ -2.31
CLOCKO15516 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.59□□□□□ -2.31
CLOCKO15516 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.59□□□□□ -2.31
CLOCKO15516 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC005828.6-201ENST00000606610 232 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AL357075.2-201ENST00000614906 189 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC104260.1-201ENST00000616660 539 ntBASIC0.59□□□□□ -2.31
CLOCKO15516 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.32
CLOCKO15516 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CLOCKO15516 RNU6-842P-201ENST00000384269 107 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 Y_RNA.498-201ENST00000384460 102 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 MIR7-2-201ENST00000384970 110 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 MIR190B-201ENST00000401119 79 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
CLOCKO15516 SUMO1P2-201ENST00000452524 304 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 AC018448.1-201ENST00000552843 316 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 AC022079.1-201ENST00000621546 602 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 AL008636.1-201ENST00000625038 1018 ntBASIC0.58□□□□□ -2.32
CLOCKO15516 SNORD114-7-201ENST00000362520 77 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 Y_RNA.48-201ENST00000362710 103 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 Y_RNA.330-201ENST00000365230 109 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 Y_RNA.364-201ENST00000365532 101 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 MIR452-201ENST00000385020 85 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.57□□□□□ -2.32
CLOCKO15516 MTND1P29-201ENST00000448112 647 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.57□□□□□ -2.32
CLOCKO15516 AC098826.2-201ENST00000452011 651 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 SNORD5.1-201ENST00000458800 75 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.57□□□□□ -2.32
CLOCKO15516 RNU6-273P-201ENST00000516937 96 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 AP003716.2-201ENST00000528260 108 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 MIR5701-3-201ENST00000578890 82 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 MIR5701-1-201ENST00000585138 82 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 MIR5701-2-201ENST00000615634 82 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
CLOCKO15516 AC090617.10-201ENST00000624308 134 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms