Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNA5SP368-201ENST00000364298 116 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.02□□□□□ -2.57
HMGN4O00479 MIR215-201ENST00000384858 110 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 RNU6-550P-201ENST00000391057 101 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 AL359672.1-201ENST00000442302 409 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 MTND4P18-201ENST00000447010 465 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.02□□□□□ -2.57
HMGN4O00479 BNIP3P39-201ENST00000601077 554 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 AC006386.1-201ENST00000619436 415 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 AC022418.1-201ENST00000624118 445 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 MIR655-201ENST00000362159 97 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 SNORA51.10-201ENST00000384418 136 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.03□□□□□ -2.57
HMGN4O00479 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.03□□□□□ -2.57
HMGN4O00479 AC119618.1-201ENST00000434191 222 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 AF186996.7-201ENST00000492781 209 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 RNU6-612P-201ENST00000516909 102 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.03□□□□□ -2.57
HMGN4O00479 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.03□□□□□ -2.57
HMGN4O00479 LRRC34P1-201ENST00000542742 915 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.03□□□□□ -2.57
HMGN4O00479 MTND4P33-201ENST00000556706 766 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 AC138749.4-201ENST00000563970 127 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 U7.6-201ENST00000610841 64 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 MTND1P7-201ENST00000632801 297 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 AC010332.2-201ENST00000613083 1904 ntBASIC-1.03□□□□□ -2.57
HMGN4O00479 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 SNORA20B-201ENST00000384220 132 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 SNORD28-201ENST00000384706 75 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 MIR570-201ENST00000384917 97 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 MIR563-201ENST00000385080 79 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 MIR548L-201ENST00000408303 86 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AC244250.2-201ENST00000418731 148 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.04□□□□□ -2.58
HMGN4O00479 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.04□□□□□ -2.58
HMGN4O00479 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.04□□□□□ -2.58
HMGN4O00479 RPL22P17-201ENST00000438729 315 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 MTCO2P3-201ENST00000442543 421 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AC107297.1-201ENST00000459991 176 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AC091885.1-201ENST00000506658 268 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 RNA5SP20-201ENST00000515976 84 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 SNORD45.4-201ENST00000516629 73 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.04□□□□□ -2.58
HMGN4O00479 RMST_3.1-201ENST00000611651 109 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.04□□□□□ -2.58
HMGN4O00479 AC009159.2-201ENST00000617603 606 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 AC068137.4-201ENST00000638485 296 ntBASIC-1.04□□□□□ -2.58
HMGN4O00479 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
HMGN4O00479 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.05□□□□□ -2.58
HMGN4O00479 MCFD2P1-201ENST00000417812 300 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 AC018865.2-201ENST00000423631 129 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 AL358934.1-201ENST00000432346 324 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 MTND2P3-201ENST00000452458 470 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 AC010587.1-201ENST00000505809 469 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 AC116353.3-201ENST00000511215 249 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 RNA5SP54-201ENST00000516951 92 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 MIR5706-201ENST00000579841 80 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 MIR4677-201ENST00000584153 80 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 AC002044.1-201ENST00000606707 158 ntBASIC-1.05□□□□□ -2.58
HMGN4O00479 MTND4P12-201ENST00000498999 1377 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 MIR873-201ENST00000401120 77 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 FCF1P9-201ENST00000412546 282 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 HMGN2P32-201ENST00000444648 269 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 AC091959.1-201ENST00000495857 238 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 MIR378D2-201ENST00000580636 98 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 FGF7P1-201ENST00000582820 288 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 MIR4639-201ENST00000584938 69 ntBASIC-1.06□□□□□ -2.58
HMGN4O00479 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 RNA5SP205-201ENST00000364653 136 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 RNU6-413P-201ENST00000384115 107 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 MIR487A-201ENST00000385009 80 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 SNORA3B-201ENST00000391305 131 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.07□□□□□ -2.58
HMGN4O00479 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 RNU6-138P-201ENST00000515952 107 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.07□□□□□ -2.58
HMGN4O00479 AL121992.2-201ENST00000606262 256 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 AC022306.2-201ENST00000617563 647 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 AC134878.1-201ENST00000619901 243 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 AC013437.2-201ENST00000639587 677 ntBASIC-1.07□□□□□ -2.58
HMGN4O00479 MIR101-2-201ENST00000362195 79 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 RNU6-266P-201ENST00000364225 107 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 RNU6-407P-201ENST00000365280 104 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 RNU6-117P-201ENST00000365415 107 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 MIR196A1-201ENST00000388006 70 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.08□□□□□ -2.58
HMGN4O00479 AL137792.2-201ENST00000443484 235 ntBASIC-1.08□□□□□ -2.58
HMGN4O00479 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.08□□□□□ -2.58
HMGN4O00479 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms