Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU6-961P-201ENST00000363893 105 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU6-1297P-201ENST00000384415 104 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 Y_RNA.605-201ENST00000410577 105 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 MTCO3P10-201ENST00000455912 772 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU7-169P-201ENST00000459456 61 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 AL049830.1-201ENST00000468034 425 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU6-322P-201ENST00000516010 103 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU7-12P-201ENST00000516030 62 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 SNORA70.12-201ENST00000516084 153 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU6-63P-201ENST00000516690 95 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 RNU2-12P-201ENST00000517216 168 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 AL358944.1-201ENST00000528537 144 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 AC006380.1-201ENST00000603598 186 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 AL050343.2-201ENST00000607338 280 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 GHRLOS.1-201ENST00000610995 70 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 AL355073.2-201ENST00000612106 557 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
SLC28A1O00337 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.13□□□□□ -2.23
SLC28A1O00337 SNORD115-30-201ENST00000364117 82 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 RNY3P4-201ENST00000384428 101 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 RNU6-136P-201ENST00000384663 107 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 MIR653-201ENST00000385279 96 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 AL451046.2-201ENST00000403074 277 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 RNU4-62P-201ENST00000410125 130 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 RBMX2P4-201ENST00000441256 376 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.13□□□□□ -2.23
SLC28A1O00337 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.13□□□□□ -2.23
SLC28A1O00337 MIR4524B-201ENST00000581569 115 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 AC104984.5-201ENST00000586878 94 ntBASIC1.13□□□□□ -2.23
SLC28A1O00337 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC28A1O00337 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SLC28A1O00337 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SLC28A1O00337 Y_RNA.259-201ENST00000364619 101 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 Y_RNA.314-201ENST00000365114 102 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 Y_RNA.361-201ENST00000365515 120 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 MIR628-201ENST00000385229 95 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 SNORD78.2-201ENST00000391076 69 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 MRPS18CP6-201ENST00000423587 223 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 AC093850.1-201ENST00000454121 251 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 ELOCP24-201ENST00000456370 334 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 MIR6715A-201ENST00000615929 79 ntBASIC1.12□□□□□ -2.23
SLC28A1O00337 RNY3P11-201ENST00000364153 102 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 SNORA2.2-201ENST00000365473 135 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 Y_RNA.387-201ENST00000383918 102 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 SNORD41-201ENST00000386967 70 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 RNU6-482P-201ENST00000391068 107 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 SNORA17.3-201ENST00000391159 129 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 AC099799.1-201ENST00000439809 192 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 RNU7-95P-201ENST00000459222 64 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 RNU6-917P-201ENST00000516294 104 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 BX284668.6-201ENST00000606899 438 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 U2.1-201ENST00000618978 145 ntBASIC1.11□□□□□ -2.23
SLC28A1O00337 MIRLET7C-201ENST00000362160 84 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 RNU6-490P-201ENST00000362985 107 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 Y_RNA.142-201ENST00000363491 102 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 RNU4-41P-201ENST00000364426 143 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SLC28A1O00337 AL354751.2-201ENST00000415471 210 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 AC108667.1-201ENST00000428618 249 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 HSPE1P13-201ENST00000451143 297 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 RNU6-1337P-201ENST00000516525 95 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.1□□□□□ -2.23
SLC28A1O00337 AC055872.1-201ENST00000570978 278 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 AC005176.2-201ENST00000596933 147 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 AL357312.1-201ENST00000603879 298 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 MTND4LP32-201ENST00000636111 270 ntBASIC1.1□□□□□ -2.23
SLC28A1O00337 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.1□□□□□ -2.23
SLC28A1O00337 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 RNA5SP99-201ENST00000364020 114 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 Y_RNA.384-201ENST00000383909 102 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 AL031003.1-201ENST00000404229 172 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 RNU2-54P-201ENST00000410299 190 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 RNA5SP511-201ENST00000410487 115 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.09□□□□□ -2.23
SLC28A1O00337 AL162725.1-201ENST00000435405 301 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 Z98949.2-201ENST00000440996 144 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 RNU6-911P-201ENST00000516523 104 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 RNU6-1012P-201ENST00000516606 109 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 AL117336.2-201ENST00000602435 335 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 AC240442.1-201ENST00000616055 283 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
SLC28A1O00337 MIR1302-1-201ENST00000637932 143 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms