Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SNORA11.2-201ENST00000408318 127 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 MIR1298-201ENST00000408783 112 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 Y_RNA.594-201ENST00000410373 140 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 RNU6-1050P-201ENST00000410388 107 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 AL354751.2-201ENST00000415471 210 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.56□□□□□ -2.32
SMKR1H3BMG3 AL162725.1-201ENST00000435405 301 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 MTND2P22-201ENST00000444325 1033 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 RPS20P10-201ENST00000451209 253 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 RPS29P25-201ENST00000481709 171 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 AP003716.2-201ENST00000528260 108 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 AC007014.2-201ENST00000615581 479 ntBASIC0.56□□□□□ -2.32
SMKR1H3BMG3 MIR103A2-201ENST00000362154 78 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 U8.5-201ENST00000364528 136 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.55□□□□□ -2.32
SMKR1H3BMG3 AL353997.1-201ENST00000432936 108 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 MTND5P15-201ENST00000434246 349 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 COX6CP14-201ENST00000469580 174 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 AC113410.1-201ENST00000505029 247 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 SNORA74.3-201ENST00000517108 154 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 AC131055.1-201ENST00000584626 316 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 MIR4762-201ENST00000585261 75 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 SEPT14P17-201ENST00000617978 177 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 MIR6866-201ENST00000638146 69 ntBASIC0.55□□□□□ -2.32
SMKR1H3BMG3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
SMKR1H3BMG3 AC023934.1-201ENST00000574529 2389 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 MIR532-201ENST00000385025 91 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 SNORD12B-201ENST00000410433 91 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 U7.7-201ENST00000459276 60 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 RNU6-329P-201ENST00000459618 107 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 AL163540.1-201ENST00000485382 386 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 RPL23AP94-201ENST00000512518 302 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 AC023442.1-201ENST00000531247 422 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 AC025627.3-201ENST00000582078 182 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 AL591926.4-201ENST00000616895 298 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 U4.5-201ENST00000617137 123 ntBASIC0.54□□□□□ -2.32
SMKR1H3BMG3 MIR520C-201ENST00000385005 87 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 MIR136-201ENST00000385207 82 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 RNU6-510P-201ENST00000391239 108 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 MIR548K-201ENST00000408406 116 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 AC092423.1-201ENST00000430165 186 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 RPL23AP50-201ENST00000434149 455 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 MIR2355-201ENST00000517199 87 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 RNU2-12P-201ENST00000517216 168 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 AC109810.1-201ENST00000534066 224 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 AC023827.1-201ENST00000569247 97 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.53□□□□□ -2.32
SMKR1H3BMG3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SMKR1H3BMG3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 SNORD115-30-201ENST00000364117 82 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AC117470.1-201ENST00000381974 330 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 MIR516B2-201ENST00000385190 85 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 MIR1185-1-201ENST00000408598 86 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AC108667.1-201ENST00000428618 249 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AC117454.1-201ENST00000491120 168 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 EIF1P4-201ENST00000572664 335 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 MIR3973-201ENST00000579824 107 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AC005899.2-201ENST00000584353 90 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AC091895.1-201ENST00000624494 256 ntBASIC0.52□□□□□ -2.33
SMKR1H3BMG3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.52□□□□□ -2.33
SMKR1H3BMG3 AL391987.6-201ENST00000305671 199 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 SNORA25.3-201ENST00000363205 127 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 RNU6-53P-201ENST00000365367 106 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 SNORD14.1-201ENST00000365609 90 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 MIR15B-201ENST00000385045 98 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AL591806.2-201ENST00000433122 173 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 RPS3AP52-201ENST00000435639 297 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.51□□□□□ -2.33
SMKR1H3BMG3 RNU7-41P-201ENST00000515917 61 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 MTND4LP26-201ENST00000518144 282 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AC011604.1-201ENST00000545978 196 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 MIR4764-201ENST00000580680 88 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AC018638.8-201ENST00000588755 281 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AC009229.3-201ENST00000608056 282 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.51□□□□□ -2.33
SMKR1H3BMG3 AC004467.1-201ENST00000615678 330 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 MIR3688-2-201ENST00000636963 87 ntBASIC0.51□□□□□ -2.33
SMKR1H3BMG3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.436-201ENST00000384097 102 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 RNU6-601P-201ENST00000384540 107 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 MIR764-201ENST00000390811 85 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 SNORD89-201ENST00000390981 114 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 MIR548F5-201ENST00000408421 86 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms