Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AL163195.1-201ENST00000496941 348 ntBASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 AC015720.1-201ENST00000565251 277 ntBASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 U1.36-201ENST00000620684 176 ntBASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MBD3L4A6NDZ8 AC016717.2-201ENST00000609089 5141 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 Y_RNA.20-201ENST00000362479 113 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 Y_RNA.65-201ENST00000362846 100 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 RNU6-801P-201ENST00000364087 105 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 MT-TG-201ENST00000387429 68 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 SNORA26.5-201ENST00000391215 123 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 MTCO2P33-201ENST00000402100 465 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 AC005972.2-201ENST00000604690 348 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 MIR6733-201ENST00000635723 61 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 U6.108-201ENST00000637764 58 ntBASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MBD3L4A6NDZ8 SNORD114-30-201ENST00000364448 72 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 RNA5SP425-201ENST00000410336 112 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 RNU6-651P-201ENST00000411040 105 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 RNU2-14P-201ENST00000411053 191 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 AL135786.1-201ENST00000415892 214 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 AC091021.1-201ENST00000468051 388 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 RPS26P45-201ENST00000471748 340 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 SNORA31.15-201ENST00000516771 132 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 AC084364.2-201ENST00000546924 395 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 AC103810.6-201ENST00000606708 136 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 snoU18.1-201ENST00000629629 71 ntBASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
MBD3L4A6NDZ8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 RNA5SP276-201ENST00000362580 94 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 RNU6-379P-201ENST00000363813 104 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 RNU1-138P-201ENST00000384093 164 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 MIR520G-201ENST00000385064 90 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 AC104332.1-201ENST00000440471 797 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 U8.19-201ENST00000459095 133 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 RNU7-141P-201ENST00000459304 62 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 RPL36AP21-201ENST00000490372 323 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 AC117454.1-201ENST00000491120 168 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 MIR4643-201ENST00000577473 78 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 AL078604.3-201ENST00000615580 211 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 MIR548AY-201ENST00000617669 107 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 AC010297.1-201ENST00000623948 149 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 MIR6079-201ENST00000635807 62 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 AC018630.2-201ENST00000534866 2403 ntBASIC2.16□□□□□ -2.06
MBD3L4A6NDZ8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
MBD3L4A6NDZ8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.267-201ENST00000364679 109 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-211P-201ENST00000384047 107 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.539-201ENST00000384635 107 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 AC245047.4-201ENST00000433189 144 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 AC069257.2-201ENST00000441819 155 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 RPS4XP11-201ENST00000446897 772 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 RNA5SP57-201ENST00000459463 123 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 RNU7-94P-201ENST00000459576 63 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 MIR4648-201ENST00000580107 72 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 AL008718.3-201ENST00000610217 321 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 ZNF702P-202ENST00000434269 1966 ntBASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
MBD3L4A6NDZ8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.82-201ENST00000363000 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.92-201ENST00000363043 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-899P-201ENST00000363947 107 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.235-201ENST00000364412 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.269-201ENST00000364685 89 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.306-201ENST00000365015 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.312-201ENST00000365089 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.322-201ENST00000365151 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU2-7P-201ENST00000410794 178 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AL356320.1-201ENST00000429616 163 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AC233266.1-201ENST00000454518 96 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.650-201ENST00000459002 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.637-201ENST00000459424 114 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms