Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 HMGN2P34-201ENST00000437647 269 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 AC104435.1-201ENST00000483483 166 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 MIR3169-201ENST00000578032 83 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 MIR4298-201ENST00000584380 73 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 AL442067.1-201ENST00000613261 223 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 AC073349.3-201ENST00000617616 186 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 MIR338-201ENST00000636369 67 ntBASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA13Q9Y5I0 MIRLET7G-201ENST00000362280 84 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 RNU1-58P-201ENST00000362413 163 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 RNY4P28-201ENST00000365281 93 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 RNU6-117P-201ENST00000365415 107 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 MIR196B-201ENST00000384852 84 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 RNU6-651P-201ENST00000411040 105 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 RPS27P22-201ENST00000478056 241 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 AL031274.2-201ENST00000599419 203 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 AC011921.3-201ENST00000605540 361 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA13Q9Y5I0 AC062016.1-201ENST00000355719 319 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 RNU1-22P-201ENST00000363334 158 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-200P-201ENST00000364743 107 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-763P-201ENST00000390865 106 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-907P-201ENST00000390924 102 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AL117342.1-201ENST00000404861 406 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AC108938.1-201ENST00000451204 136 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 RPS20P10-201ENST00000451209 253 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AC027419.1-201ENST00000522976 328 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AC021269.2-201ENST00000532318 330 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 MIR4438-201ENST00000585271 93 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHA13Q9Y5I0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 RNA5SP68-201ENST00000363885 119 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 Y_RNA.200-201ENST00000364018 102 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-211P-201ENST00000384047 107 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 SNORA72.4-201ENST00000384174 132 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 MIR515-2-201ENST00000384883 83 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 MIR515-1-201ENST00000384884 83 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 AC018634.1-201ENST00000437554 401 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 AL109933.2-201ENST00000452651 260 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 AC097462.1-201ENST00000514125 324 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 RNA5SP148-201ENST00000516527 94 ntBASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDHA13Q9Y5I0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-23P-201ENST00000363283 107 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-417P-201ENST00000384712 107 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 SNORA26.5-201ENST00000391215 123 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 RNU7-99P-201ENST00000516271 62 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 AC130289.1-201ENST00000577321 73 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 MIR5007-201ENST00000583098 95 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 AC005786.1-201ENST00000588553 154 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 AL008718.3-201ENST00000610217 321 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 MIR6817-201ENST00000615588 66 ntBASIC2.44□□□□□ -2.02
PCDHA13Q9Y5I0 AL356292.1-201ENST00000283110 373 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 MIR449A-201ENST00000362113 91 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 RNU6-899P-201ENST00000363947 107 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 RNU11-5P-201ENST00000391216 129 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 AL355497.1-201ENST00000406262 551 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 MIR1298-201ENST00000408783 112 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 CST2P1-201ENST00000425770 87 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 BTF3P11-201ENST00000426582 477 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 SNORD116-28-201ENST00000516123 91 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 RNU7-172P-201ENST00000517125 64 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 AP005660.1-201ENST00000522972 293 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 AC007229.1-201ENST00000590455 412 ntBASIC2.43□□□□□ -2.02
PCDHA13Q9Y5I0 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms