Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNA5SP168-201ENST00000516642 112 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 AC106754.2-201ENST00000623006 233 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 SNORD3E-202ENST00000627253 216 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 SNORD114-7-201ENST00000362520 77 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 RNU4-24P-201ENST00000364565 139 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.402-201ENST00000383972 102 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.559-201ENST00000384686 107 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 MIR936-201ENST00000401264 98 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 AP000870.1-201ENST00000472927 406 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 AC090142.3-201ENST00000519012 385 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 AL358944.1-201ENST00000528537 144 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 UBL5P4-201ENST00000562584 236 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
CTNNA3Q9UI47 RNU6-199P-201ENST00000362954 107 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 RNU6-1252P-201ENST00000363054 104 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 SNORA2.2-201ENST00000365473 135 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 MTCYBP4-201ENST00000401524 249 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AC002429.1-201ENST00000437672 148 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 MTND1P17-201ENST00000448961 204 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 SNORD5.1-201ENST00000458800 75 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AC097462.1-201ENST00000514125 324 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 RNU6-197P-201ENST00000516680 100 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 RNU6-341P-201ENST00000516973 96 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AC136628.3-201ENST00000521868 290 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AC090617.3-201ENST00000573670 475 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 MIR4273-201ENST00000582824 84 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 AC100812.1-201ENST00000607622 580 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 MIR6079-201ENST00000635807 62 ntBASIC0.87□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.9-201ENST00000362354 101 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.157-201ENST00000363638 102 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.251-201ENST00000364551 99 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 RNU6-1264P-201ENST00000383891 107 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 RNU6-1013P-201ENST00000384180 107 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 RNU6-424P-201ENST00000384367 105 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 SUMO1P2-201ENST00000452524 304 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 AC074133.1-201ENST00000515696 183 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 AC091144.1-201ENST00000519573 138 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 MIR5701-3-201ENST00000578890 82 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 AC091178.2-201ENST00000584401 117 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 MIR5701-1-201ENST00000585138 82 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 AL357312.1-201ENST00000603879 298 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 MIR5701-2-201ENST00000615634 82 ntBASIC0.86□□□□□ -2.27
CTNNA3Q9UI47 RNU6-727P-201ENST00000363592 107 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.405-201ENST00000383979 100 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.451-201ENST00000384200 100 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.524-201ENST00000384564 100 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.561-201ENST00000384694 100 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 SNORD41-201ENST00000386967 70 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC006461.1-201ENST00000412637 326 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC009161.1-201ENST00000417306 376 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC114482.1-201ENST00000418010 247 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 RPL30P16-201ENST00000419341 429 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 MTND3P23-201ENST00000431980 347 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 MTCO2P7-201ENST00000446518 666 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 RNU6-1314P-201ENST00000517139 104 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 MIR3942-201ENST00000585264 109 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC005828.6-201ENST00000606610 232 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 AC015540.1-201ENST00000615828 501 ntBASIC0.85□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.115-201ENST00000363272 98 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.533-201ENST00000384596 114 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 RNA5SP482-201ENST00000391269 118 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 EIF1P2-201ENST00000428233 350 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 RPS27P22-201ENST00000478056 241 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 RPS29P25-201ENST00000481709 171 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 AC010469.2-201ENST00000496412 480 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 OR9P1P-201ENST00000496431 281 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 RNU6-322P-201ENST00000516010 103 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.706-201ENST00000516933 99 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 RPL21P9-201ENST00000556149 474 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 EIF1P4-201ENST00000572664 335 ntBASIC0.84□□□□□ -2.27
CTNNA3Q9UI47 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.41-201ENST00000362646 102 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 SNORA20B-201ENST00000384220 132 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 RNU6-1145P-201ENST00000384246 107 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 Y_RNA.573-201ENST00000384763 105 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AC022493.2-201ENST00000506122 481 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 RNU6-947P-201ENST00000516264 106 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 RNU6-314P-201ENST00000516574 104 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 RNU6-566P-201ENST00000516790 107 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 RNU7-172P-201ENST00000517125 64 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AP002004.2-201ENST00000531656 154 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AC245505.1-201ENST00000556398 224 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AF250324.2-201ENST00000608299 610 ntBASIC0.83□□□□□ -2.28
CTNNA3Q9UI47 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms