Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 MTND5P16-201ENST00000460269 1703 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 HMGN2P26-201ENST00000463169 339 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RPL30P10-201ENST00000488148 337 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.665-201ENST00000516177 98 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AC025647.1-201ENST00000517879 253 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AC004812.1-201ENST00000540773 146 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 7SK.7-201ENST00000603504 247 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AC245008.1-201ENST00000608123 476 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNU6-1252P-201ENST00000363054 104 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 SNORA33-201ENST00000363664 130 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU4-20P-201ENST00000365601 151 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.415-201ENST00000384012 112 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-1042P-201ENST00000384204 107 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.490-201ENST00000384413 102 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 MIR32-201ENST00000384965 70 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-373P-201ENST00000411247 98 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 MTND2P22-201ENST00000444325 1033 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC098826.2-201ENST00000452011 651 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC093850.1-201ENST00000454121 251 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC023157.2-201ENST00000540596 141 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 MIR3942-201ENST00000585264 109 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AL078596.1-201ENST00000624856 447 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC073544.1-201ENST00000600110 1595 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 SNORD50.1-201ENST00000362987 71 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNA5SP457-201ENST00000363657 124 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-961P-201ENST00000363893 105 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 SNORD115-32-201ENST00000364079 82 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.339-201ENST00000365325 102 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNA5SP219-201ENST00000390940 113 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC006461.1-201ENST00000412637 326 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC114482.1-201ENST00000418010 247 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AL590632.1-201ENST00000424289 371 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 MTND3P21-201ENST00000433774 331 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC005002.2-201ENST00000438228 269 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC093019.1-201ENST00000443135 252 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU7-90P-201ENST00000459216 62 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RPL17P19-201ENST00000489069 552 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 SNORD79.1-201ENST00000516069 84 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-1291P-201ENST00000516591 104 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-256P-201ENST00000516747 97 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-273P-201ENST00000516937 96 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC036111.3-201ENST00000526389 112 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC024909.2-201ENST00000553035 286 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 MIR8087-201ENST00000612745 78 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 AC097520.1-201ENST00000624435 385 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 MIR3662-201ENST00000637030 95 ntBASIC0.42□□□□□ -2.34
CCDC88CQ9P219 RNU6-99P-201ENST00000364721 107 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.363-201ENST00000365529 113 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.41□□□□□ -2.34
CCDC88CQ9P219 SNORD116-11-201ENST00000383882 92 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 MIR625-201ENST00000385047 85 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 SNORD89-201ENST00000390981 114 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.582-201ENST00000391023 95 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 RNA5SP482-201ENST00000391269 118 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 MRPL42P3-201ENST00000401492 326 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 AC016909.1-201ENST00000415916 166 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 USP9YP30-201ENST00000430729 455 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 STAG3L5P-204ENST00000443759 179 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 RNU6-329P-201ENST00000459618 107 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 RPS3AP17-201ENST00000472594 777 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 PDCD5P2-201ENST00000507570 312 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 RNU6-506P-201ENST00000516553 94 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 RNU6-922P-201ENST00000516753 99 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 RNU6-58P-201ENST00000517143 103 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 AL590705.4-201ENST00000532209 134 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC88CQ9P219 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC88CQ9P219 NBR2-204ENST00000587322 63 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 MIR6128-201ENST00000615528 109 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 U6.73-201ENST00000619194 103 ntBASIC0.41□□□□□ -2.34
CCDC88CQ9P219 SNORD114-7-201ENST00000362520 77 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.4□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.453-201ENST00000384223 109 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 SNORD116-13-201ENST00000384408 92 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 RNU6-331P-201ENST00000384724 107 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 RNU6-510P-201ENST00000391239 108 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.4□□□□□ -2.34
CCDC88CQ9P219 EIF1P2-201ENST00000428233 350 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 MTND1P1-201ENST00000445453 368 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 AC245047.8-201ENST00000456455 284 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 RPS29P25-201ENST00000481709 171 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 COX6CP6-201ENST00000490840 228 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms