Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC131280.1-202ENST00000624067 4211 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.199-201ENST00000364014 102 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.270-201ENST00000364693 104 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR586-201ENST00000385035 97 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-107P-201ENST00000516643 102 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 RNA5SP137-201ENST00000516833 135 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR4643-201ENST00000577473 78 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 AC008749.1-201ENST00000597650 306 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 AC006001.4-201ENST00000622243 395 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NCKIPSDQ9NZQ3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 UBE2WP1-201ENST00000362030 340 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORD31B-201ENST00000364977 69 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORA72.2-201ENST00000365028 127 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORD14D-201ENST00000384390 87 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR1262-201ENST00000408276 93 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR1283-1-201ENST00000408494 87 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU2-54P-201ENST00000410299 190 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 AC104332.1-201ENST00000440471 797 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 AC005042.3-201ENST00000453230 174 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.644-201ENST00000459006 113 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.674-201ENST00000516362 113 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 CBX3P4-201ENST00000538909 354 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR3145-201ENST00000580727 82 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR4753-201ENST00000585119 83 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 Z83818.1-201ENST00000603584 150 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NCKIPSDQ9NZQ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR411-201ENST00000362239 96 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 U3.8-201ENST00000363675 217 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR300-201ENST00000401138 83 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 AC018634.1-201ENST00000437554 401 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 POLR2KP2-201ENST00000438155 177 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 RNU6-155P-201ENST00000516347 100 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 SNORA27.4-201ENST00000516650 95 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR4282-201ENST00000583613 67 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 AC245884.12-201ENST00000615364 59 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 MIR219B-201ENST00000637023 88 ntBASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NCKIPSDQ9NZQ3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-740P-201ENST00000364734 105 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 RNY4P28-201ENST00000365281 93 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-886P-201ENST00000384319 105 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR548M-201ENST00000408260 86 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU4-61P-201ENST00000411243 107 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.626-201ENST00000411288 95 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 TOMM22P2-201ENST00000430735 237 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 AC016925.1-201ENST00000458303 298 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 AL137100.2-201ENST00000555786 315 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 RPL21P9-201ENST00000556149 474 ntBASIC2.21□□□□□ -2.06
NCKIPSDQ9NZQ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms