Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC098592.1-201ENST00000419352 333 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 PIGPP3-201ENST00000425307 415 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRIM4Q9C037 AL392103.1-201ENST00000447000 198 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.15□□□□□ -2.43
TRIM4Q9C037 RNA5SP227-201ENST00000516184 113 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 MIR4764-201ENST00000580680 88 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 AC120024.3-201ENST00000603167 156 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 AP000240.1-201ENST00000609910 452 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 MIR7844-201ENST00000616161 122 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 MIR1302-7-201ENST00000408841 72 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRIM4Q9C037 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 ZNF114P1-201ENST00000453500 292 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AC107401.1-201ENST00000503426 685 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AC010598.1-201ENST00000510378 103 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 RNU6-863P-201ENST00000515989 104 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AL137161.1-201ENST00000532231 390 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AL158211.1-201ENST00000566763 763 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 MIR5583-1-201ENST00000580941 59 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AL158050.2-201ENST00000605336 568 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 AC027279.3-201ENST00000625055 122 ntBASIC-0.16□□□□□ -2.44
TRIM4Q9C037 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRIM4Q9C037 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
TRIM4Q9C037 RNU6-727P-201ENST00000363592 107 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 U8.7-201ENST00000364940 136 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 SNORD14.1-201ENST00000365609 90 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 MIR224-201ENST00000384889 81 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 MIR122-201ENST00000385044 85 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 RNU2-29P-201ENST00000410423 189 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 RNA5SP451-201ENST00000410588 110 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 PCNPP5-201ENST00000452246 481 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 MTATP6P14-201ENST00000455189 673 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 RPL23AP75-201ENST00000491601 451 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 SNORA25.14-201ENST00000516481 132 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 MIR4290-201ENST00000583807 95 ntBASIC-0.17□□□□□ -2.44
TRIM4Q9C037 MIR516B2-201ENST00000385190 85 ntBASIC-0.18□□□□□ -2.44
TRIM4Q9C037 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.18□□□□□ -2.44
TRIM4Q9C037 MIR1298-201ENST00000408783 112 ntBASIC-0.18□□□□□ -2.44
TRIM4Q9C037 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.18□□□□□ -2.44
TRIM4Q9C037 MTND4LP11-201ENST00000422184 280 ntBASIC-0.18□□□□□ -2.44
TRIM4Q9C037 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.18□□□□□ -2.44
TRIM4Q9C037 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.18□□□□□ -2.44
TRIM4Q9C037 MTND4P18-201ENST00000447010 465 ntBASIC-0.18□□□□□ -2.44
TRIM4Q9C037 MIR3682-201ENST00000581338 84 ntBASIC-0.18□□□□□ -2.44
TRIM4Q9C037 SNORA25.18-201ENST00000607153 114 ntBASIC-0.18□□□□□ -2.44
TRIM4Q9C037 SNORD113-6-201ENST00000363345 75 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 SNORD115-8-201ENST00000363856 82 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 SNORD115-38-201ENST00000365037 82 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 AL049545.1-201ENST00000401856 572 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRIM4Q9C037 SNX3P1X-201ENST00000414887 175 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 AC009961.2-201ENST00000435771 251 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRIM4Q9C037 AC114811.1-201ENST00000507207 168 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 SCOCP1-201ENST00000554676 349 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 RBM11P1-201ENST00000604951 799 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 AC107308.1-201ENST00000615897 301 ntBASIC-0.19□□□□□ -2.44
TRIM4Q9C037 RNU6-784P-201ENST00000384330 106 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 RNU6-606P-201ENST00000384721 111 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 RNU6-376P-201ENST00000384731 106 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 MRPS10P2-201ENST00000431226 381 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 SNORD57-201ENST00000448188 72 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.2□□□□□ -2.44
TRIM4Q9C037 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRIM4Q9C037 AC104576.1-201ENST00000524225 88 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.2□□□□□ -2.44
TRIM4Q9C037 AL355073.2-201ENST00000612106 557 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.2□□□□□ -2.44
TRIM4Q9C037 RNU6-903P-201ENST00000391270 109 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 RNU6-613P-201ENST00000410412 108 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRIM4Q9C037 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRIM4Q9C037 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRIM4Q9C037 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRIM4Q9C037 AL139396.1-201ENST00000421137 167 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 RNU7-43P-201ENST00000516554 64 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 SNORA18.7-201ENST00000516910 131 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 RNY1P9-201ENST00000532431 109 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 AC112693.2-201ENST00000556538 232 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 RPL23AP91-201ENST00000569211 455 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 MIR548AO-201ENST00000579992 96 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 AC104408.1-201ENST00000605241 170 ntBASIC-0.21□□□□□ -2.44
TRIM4Q9C037 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 RNU6-873P-201ENST00000363833 107 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 RNA5SP496-201ENST00000391240 109 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AL009048.1-201ENST00000450437 298 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 RPS3AP17-201ENST00000472594 777 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 AC091179.3-201ENST00000474761 144 ntBASIC-0.22□□□□□ -2.44
TRIM4Q9C037 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRIM4Q9C037 RNU6-977P-201ENST00000516411 103 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms