Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 AC012433.1-201ENST00000588916 398 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 AC078880.5-201ENST00000617845 421 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 RNU6-25P-201ENST00000383873 107 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 RNU6-29P-201ENST00000384637 107 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 MTND3P20-201ENST00000407663 186 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 RNU7-62P-201ENST00000458856 62 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 SNORD54-201ENST00000459159 67 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 SNORA27.4-201ENST00000516650 95 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 RNU6-685P-201ENST00000517088 95 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 AC090897.1-201ENST00000580909 226 ntBASIC-0.42□□□□□ -2.48
CSMD3Q7Z407 SNORA25.7-201ENST00000364375 127 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 RNU6-652P-201ENST00000365488 107 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 MLLT10P1-201ENST00000418346 262 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 USP9YP29-201ENST00000445112 563 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 MIR196A1-201ENST00000388006 70 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 AL136310.1-201ENST00000404926 654 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 RNU6-287P-201ENST00000516230 98 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 uc_338.11-201ENST00000619132 160 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 RNU6-161P-201ENST00000363051 106 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 AC004866.1-201ENST00000411748 78 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 MTCO3P19-201ENST00000415864 321 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 AL353997.1-201ENST00000432936 108 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 MTND4P32-201ENST00000437189 1237 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 MTND3P25-201ENST00000509243 135 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 MTND4LP25-201ENST00000570218 163 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 FGF7P1-201ENST00000582820 288 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 AL450270.1-201ENST00000606160 391 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 AC013437.2-201ENST00000639587 677 ntBASIC-0.43□□□□□ -2.48
CSMD3Q7Z407 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU6-468P-201ENST00000384003 109 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU6-207P-201ENST00000384137 107 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 MIR548L-201ENST00000408303 86 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC243428.1-201ENST00000421099 264 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 MIR18B-201ENST00000454574 71 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU7-172P-201ENST00000517125 64 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC109479.2-201ENST00000517842 174 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 MIR3152-201ENST00000579801 74 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC091178.2-201ENST00000584401 117 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC008521.1-201ENST00000587471 187 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC006504.8-201ENST00000621046 635 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU6-384P-201ENST00000364900 104 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 MIR558-201ENST00000384920 94 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU6-205P-201ENST00000390858 107 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 MIR378D2-201ENST00000580636 98 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC068790.2-201ENST00000602601 557 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 BTBD7P2-201ENST00000441962 620 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RN7SKP19-201ENST00000516016 252 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU7-156P-201ENST00000517214 74 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AC104072.1-201ENST00000568817 668 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 AL391099.1-201ENST00000624635 187 ntBASIC-0.44□□□□□ -2.48
CSMD3Q7Z407 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 RNU6-792P-201ENST00000363490 107 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 MIR1257-201ENST00000408490 117 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 RPL21P38-201ENST00000418090 167 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC087894.1-201ENST00000538359 518 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 MIR5706-201ENST00000579841 80 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 MIR544B-201ENST00000582372 78 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 SNORD92-201ENST00000585078 85 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 BNIP3P39-201ENST00000601077 554 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 U7.6-201ENST00000610841 64 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC010608.3-201ENST00000625048 527 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 MTCYBP4-201ENST00000401524 249 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 MTND4P3-201ENST00000417829 541 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC069271.1-201ENST00000445577 156 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 RNU6-221P-201ENST00000459541 99 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC091951.3-201ENST00000504093 246 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC138649.3-201ENST00000622154 254 ntBASIC-0.45□□□□□ -2.48
CSMD3Q7Z407 AC019226.2-201ENST00000625973 424 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms