Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MIR559-201ENST00000385188 96 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
PTCH1Q13635 MTCO3P29-201ENST00000432119 779 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RPL23AP50-201ENST00000434149 455 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 AC069257.2-201ENST00000441819 155 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RPS26P55-201ENST00000471178 356 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 AC022493.2-201ENST00000506122 481 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 AC079140.2-201ENST00000506193 142 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RNU6-1041P-201ENST00000516254 102 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 RNU6-264P-201ENST00000517134 104 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PTCH1Q13635 AL590705.4-201ENST00000532209 134 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 MIR4714-201ENST00000580728 77 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 AL121890.5-201ENST00000620848 304 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 AC090971.5-201ENST00000621102 293 ntBASIC1.39□□□□□ -2.19
PTCH1Q13635 MIR369-201ENST00000362155 70 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RNU6-545P-201ENST00000362681 104 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 Y_RNA.115-201ENST00000363272 98 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 Y_RNA.128-201ENST00000363391 112 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 Y_RNA.138-201ENST00000363462 102 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RNU6-1227P-201ENST00000383981 107 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RNU6-968P-201ENST00000384076 107 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 Y_RNA.463-201ENST00000384271 102 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 Y_RNA.577-201ENST00000384794 101 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 MIR513A1-201ENST00000385138 129 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 AC018865.2-201ENST00000423631 129 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 MTCYBP6-201ENST00000441810 138 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 AL137792.2-201ENST00000443484 235 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RPL30P10-201ENST00000488148 337 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 AF186996.7-201ENST00000492781 209 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RNU6-1153P-201ENST00000516760 105 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RNU6-699P-201ENST00000517081 110 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 MIR4753-201ENST00000585119 83 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 uc_338.22-201ENST00000622722 187 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 AC091925.1-201ENST00000623204 462 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 AC134503.1-201ENST00000633048 54 ntBASIC1.38□□□□□ -2.19
PTCH1Q13635 RNU6-1115P-201ENST00000362490 106 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RNA5SP257-201ENST00000363023 116 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 Y_RNA.252-201ENST00000364556 101 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RNU6-99P-201ENST00000364721 107 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RNU4-9P-201ENST00000364951 139 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PTCH1Q13635 RNU6-1156P-201ENST00000410365 100 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RNA5SP494-201ENST00000410653 129 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 AL354751.2-201ENST00000415471 210 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 MTCO2P12-201ENST00000427426 682 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 AC067942.3-201ENST00000512025 362 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RNU7-175P-201ENST00000515915 61 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RNU6-976P-201ENST00000516086 111 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 RN7SKP179-201ENST00000516126 217 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 AC036111.3-201ENST00000526389 112 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 SCARNA4-201ENST00000629045 128 ntBASIC1.37□□□□□ -2.19
PTCH1Q13635 SNORD115-32-201ENST00000364079 82 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 Y_RNA.405-201ENST00000383979 100 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 RNU6-418P-201ENST00000384035 107 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 Y_RNA.451-201ENST00000384200 100 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 RNU6-17P-201ENST00000384245 107 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 RNU6-18P-201ENST00000384527 107 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 Y_RNA.524-201ENST00000384564 100 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 RNU6-1011P-201ENST00000384668 107 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 Y_RNA.561-201ENST00000384694 100 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 MTCYBP10-201ENST00000424905 650 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.36□□□□□ -2.19
PTCH1Q13635 AC098934.3-201ENST00000430450 190 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AL353997.1-201ENST00000432936 108 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AC245047.4-201ENST00000433189 144 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 Z82188.1-201ENST00000436709 154 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.36□□□□□ -2.19
PTCH1Q13635 MIR2053-201ENST00000459295 91 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AC099513.1-201ENST00000490423 301 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 RNU2-34P-201ENST00000516534 121 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.36□□□□□ -2.19
PTCH1Q13635 AC020661.2-201ENST00000560114 134 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AL356055.1-201ENST00000602528 446 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.36□□□□□ -2.19
PTCH1Q13635 AC137590.2-201ENST00000619709 240 ntBASIC1.36□□□□□ -2.19
PTCH1Q13635 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PTCH1Q13635 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
PTCH1Q13635 Y_RNA.31-201ENST00000362574 102 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 Y_RNA.496-201ENST00000384444 101 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 MIR32-201ENST00000384965 70 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 RNU6-700P-201ENST00000391043 107 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 MIR1302-11-201ENST00000408051 138 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 MIR1302-9-201ENST00000408365 138 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 MIR1302-10-201ENST00000408734 138 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 RPS26P42-201ENST00000413485 326 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 RPL30P13-201ENST00000418873 348 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.35□□□□□ -2.19
PTCH1Q13635 OR2AQ1P-201ENST00000451972 200 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 Y_RNA.631-201ENST00000459607 101 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 RNU6-856P-201ENST00000516959 98 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 RNA5SP437-201ENST00000517249 129 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.35□□□□□ -2.19
PTCH1Q13635 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.35□□□□□ -2.19
PTCH1Q13635 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.35□□□□□ -2.19
PTCH1Q13635 MIR1302-2-201ENST00000607096 138 ntBASIC1.35□□□□□ -2.19
PTCH1Q13635 RNU6-137P-201ENST00000363680 108 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 442.3 ms