Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-376P-201ENST00000384731 106 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AL353997.1-201ENST00000432936 108 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MTCO1P27-201ENST00000448269 226 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.36□□□□□ -2.47
HSPG2P98160 AC010424.1-201ENST00000506336 297 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.36□□□□□ -2.47
HSPG2P98160 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR4438-201ENST00000585271 93 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
HSPG2P98160 AC010608.3-201ENST00000625048 527 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR125B2-201ENST00000385128 89 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC010493.1-201ENST00000513479 292 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 SNORA18.4-201ENST00000516440 124 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC099785.1-201ENST00000605697 437 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.36□□□□□ -2.47
HSPG2P98160 AC084368.1-201ENST00000620935 65 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC093726.3-201ENST00000637588 150 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR501-201ENST00000390204 84 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 HSFY7P-201ENST00000432672 318 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 HSFY8P-201ENST00000437934 318 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MTND1P26-201ENST00000440488 538 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC004386.2-201ENST00000441858 148 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC079781.2-201ENST00000446424 169 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-504P-201ENST00000516568 104 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-63P-201ENST00000516690 95 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-64P-201ENST00000517119 105 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC087894.1-201ENST00000538359 518 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AL157687.1-201ENST00000554853 619 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR3146-201ENST00000580367 79 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR4639-201ENST00000584938 69 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AL354696.1-201ENST00000614652 497 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC105081.1-201ENST00000617727 106 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC091304.10-201ENST00000641554 121 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU6-205P-201ENST00000390858 107 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR1257-201ENST00000408490 117 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 RNU7-57P-201ENST00000459540 60 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC107401.1-201ENST00000503426 685 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.36□□□□□ -2.47
HSPG2P98160 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.36□□□□□ -2.47
HSPG2P98160 MIR3684-201ENST00000579779 74 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC174048.1-201ENST00000603389 144 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC020891.4-201ENST00000605745 93 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AC245008.1-201ENST00000608123 476 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 AL008636.1-201ENST00000625038 1018 ntBASIC-0.36□□□□□ -2.47
HSPG2P98160 MT-TY-201ENST00000387409 66 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU6-341P-201ENST00000516973 96 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR1322-201ENST00000638013 71 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU6-511P-201ENST00000363496 107 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU6-289P-201ENST00000364093 107 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNY3P13-201ENST00000365542 102 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR215-201ENST00000384858 110 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR452-201ENST00000385020 85 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR516B2-201ENST00000385190 85 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR208B-201ENST00000401172 77 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU2-39P-201ENST00000410604 198 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU7-182P-201ENST00000459009 62 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.37□□□□□ -2.47
HSPG2P98160 HSPE1P23-201ENST00000509838 286 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC097462.1-201ENST00000514125 324 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AL442067.1-201ENST00000613261 223 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR873-201ENST00000401120 77 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AL117339.3-201ENST00000418733 162 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC098592.1-201ENST00000419352 333 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC243428.1-201ENST00000421099 264 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.37□□□□□ -2.47
HSPG2P98160 AL360271.2-201ENST00000447710 161 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC026414.1-201ENST00000504046 698 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNA5SP216-201ENST00000516111 123 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNA5SP454-201ENST00000517231 127 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 ADI1P3-201ENST00000549509 470 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 MIR3925-201ENST00000584674 77 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 AC005609.4-201ENST00000625071 447 ntBASIC-0.37□□□□□ -2.47
HSPG2P98160 RNU6-227P-201ENST00000362865 103 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 SNORA63C-201ENST00000364578 129 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MIR578-201ENST00000384828 96 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU4-30P-201ENST00000410245 143 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 HLA-S-202ENST00000425174 53 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU7-185P-201ENST00000459215 60 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC116353.2-201ENST00000505332 712 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC116562.3-201ENST00000506136 177 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.38□□□□□ -2.47
HSPG2P98160 AC093303.1-201ENST00000514549 295 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC021146.6-201ENST00000514659 117 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNY4P37-201ENST00000516225 96 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC068587.4-201ENST00000533893 186 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.38□□□□□ -2.47
HSPG2P98160 AC010205.1-201ENST00000616668 449 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms