Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU6-376P-201ENST00000384731 106 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 RNA5SP482-201ENST00000391269 118 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 AL590632.1-201ENST00000424289 371 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 HMGN1P33-201ENST00000432945 451 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 MTCO1P19-201ENST00000443487 500 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 RPS20P10-201ENST00000451209 253 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 AP000870.1-201ENST00000472927 406 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.54□□□□□ -2.32
CLDN6P56747 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 MTND1P15-201ENST00000579262 949 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 AC012557.2-201ENST00000605919 418 ntBASIC0.54□□□□□ -2.32
CLDN6P56747 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.54□□□□□ -2.32
CLDN6P56747 RNU6-1085P-201ENST00000363576 107 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 RNU6-407P-201ENST00000365280 104 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 Y_RNA.359-201ENST00000365498 102 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 Y_RNA.373-201ENST00000365600 103 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 SNORA20B-201ENST00000384220 132 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 Y_RNA.553-201ENST00000384670 102 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 MTND1P11-201ENST00000456661 876 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 AC018710.1-201ENST00000506509 158 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 RNU6-1291P-201ENST00000516591 104 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 ZNF519P2-201ENST00000557032 169 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 AL158211.1-201ENST00000566763 763 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 AC091178.2-201ENST00000584401 117 ntBASIC0.53□□□□□ -2.32
CLDN6P56747 MIRLET7C-201ENST00000362160 84 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 Y_RNA.330-201ENST00000365230 109 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 RNU6-1335P-201ENST00000365426 107 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 MIR526A1-201ENST00000384897 85 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 RNU6-1068P-201ENST00000410958 103 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
CLDN6P56747 Y_RNA.683-201ENST00000516508 93 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 AC022868.1-201ENST00000517767 391 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.52□□□□□ -2.33
CLDN6P56747 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CLDN6P56747 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 MIR6863-201ENST00000636112 90 ntBASIC0.52□□□□□ -2.33
CLDN6P56747 AC018865.2-201ENST00000423631 129 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 snoU13.25-201ENST00000458945 104 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 RNA5SP20-201ENST00000515976 84 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 Y_RNA.665-201ENST00000516177 98 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.51□□□□□ -2.33
CLDN6P56747 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CLDN6P56747 AC006362.1-201ENST00000567392 174 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.51□□□□□ -2.33
CLDN6P56747 MIR4514-201ENST00000581410 57 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 MIR3192-201ENST00000584920 77 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 AC019193.3-201ENST00000609144 554 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.51□□□□□ -2.33
CLDN6P56747 MIR891A-201ENST00000401237 79 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.5□□□□□ -2.33
CLDN6P56747 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.5□□□□□ -2.33
CLDN6P56747 MTATP6P13-201ENST00000438531 667 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AC010424.1-201ENST00000506336 297 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 RNU7-175P-201ENST00000515915 61 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 RNU6-1116P-201ENST00000517269 99 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.5□□□□□ -2.33
CLDN6P56747 AL360085.1-201ENST00000604713 532 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AC124303.1-201ENST00000605703 360 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AL138726.1-201ENST00000614873 333 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AC068137.3-201ENST00000639191 341 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AC068700.1-201ENST00000565862 3754 ntBASIC0.5□□□□□ -2.33
CLDN6P56747 AC073544.1-201ENST00000600110 1595 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CLDN6P56747 RNA5SP264-201ENST00000363115 107 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 ZNF885P-201ENST00000420174 1098 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 SEPT14P3-201ENST00000439401 183 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AL732372.2-207ENST00000445840 183 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 SEPT14P2-201ENST00000453405 183 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AC233266.1-201ENST00000454518 96 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 HMGN2P26-201ENST00000463169 339 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 SEPT14P4-201ENST00000513445 186 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 RNU6-1278P-201ENST00000516130 107 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 FO082796.1-201ENST00000523795 183 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AC023827.1-201ENST00000569247 97 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AC010525.2-201ENST00000590920 195 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AC242852.1-201ENST00000612151 96 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AC244015.1-201ENST00000622301 99 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 AC090582.1-201ENST00000636321 199 ntBASIC0.49□□□□□ -2.33
CLDN6P56747 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CLDN6P56747 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
CLDN6P56747 MIR103A2-201ENST00000362154 78 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 SNORA27.1-201ENST00000362604 124 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 Y_RNA.336-201ENST00000365307 109 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.48□□□□□ -2.33
CLDN6P56747 SNORD89-201ENST00000390981 114 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 MTCYBP4-201ENST00000401524 249 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 SNORD99-201ENST00000408612 74 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 Y_RNA.615-201ENST00000410769 117 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 AC243428.1-201ENST00000421099 264 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 AC098869.1-201ENST00000481627 292 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 MIR5696-201ENST00000578474 85 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 MIR3684-201ENST00000579779 74 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.48□□□□□ -2.33
CLDN6P56747 AC007014.2-201ENST00000615581 479 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms