Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.58□□□□□ -2.16
LIG4P49917 AC093027.1-201ENST00000546698 429 ntBASIC1.58□□□□□ -2.16
LIG4P49917 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
LIG4P49917 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
LIG4P49917 U2.1-201ENST00000618978 145 ntBASIC1.58□□□□□ -2.16
LIG4P49917 RNA5SP432-201ENST00000362480 116 ntBASIC1.57□□□□□ -2.16
LIG4P49917 RNU6-961P-201ENST00000363893 105 ntBASIC1.57□□□□□ -2.16
LIG4P49917 MRPL35P1-201ENST00000404272 572 ntBASIC1.57□□□□□ -2.16
LIG4P49917 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.57□□□□□ -2.16
LIG4P49917 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
LIG4P49917 FCF1P4-201ENST00000448326 183 ntBASIC1.57□□□□□ -2.16
LIG4P49917 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.57□□□□□ -2.16
LIG4P49917 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.57□□□□□ -2.16
LIG4P49917 AC079140.2-201ENST00000506193 142 ntBASIC1.57□□□□□ -2.16
LIG4P49917 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.57□□□□□ -2.16
LIG4P49917 AL117351.2-201ENST00000513571 157 ntBASIC1.57□□□□□ -2.16
LIG4P49917 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
LIG4P49917 AC023442.1-201ENST00000531247 422 ntBASIC1.57□□□□□ -2.16
LIG4P49917 AL390123.1-201ENST00000603216 237 ntBASIC1.57□□□□□ -2.16
LIG4P49917 AC005828.6-201ENST00000606610 232 ntBASIC1.57□□□□□ -2.16
LIG4P49917 AC138305.3-201ENST00000624988 240 ntBASIC1.57□□□□□ -2.16
LIG4P49917 MIR6079-201ENST00000635807 62 ntBASIC1.57□□□□□ -2.16
LIG4P49917 AC112487.2-201ENST00000637950 304 ntBASIC1.57□□□□□ -2.16
LIG4P49917 Y_RNA.187-201ENST00000363918 113 ntBASIC1.56□□□□□ -2.16
LIG4P49917 Y_RNA.463-201ENST00000384271 102 ntBASIC1.56□□□□□ -2.16
LIG4P49917 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
LIG4P49917 MIR873-201ENST00000401120 77 ntBASIC1.56□□□□□ -2.16
LIG4P49917 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.56□□□□□ -2.16
LIG4P49917 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.56□□□□□ -2.16
LIG4P49917 AC096644.2-201ENST00000429278 159 ntBASIC1.56□□□□□ -2.16
LIG4P49917 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.56□□□□□ -2.16
LIG4P49917 AC245517.4-201ENST00000448601 281 ntBASIC1.56□□□□□ -2.16
LIG4P49917 RNU6-911P-201ENST00000516523 104 ntBASIC1.56□□□□□ -2.16
LIG4P49917 AC019176.1-201ENST00000518519 225 ntBASIC1.56□□□□□ -2.16
LIG4P49917 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.56□□□□□ -2.16
LIG4P49917 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
LIG4P49917 RPL21P9-201ENST00000556149 474 ntBASIC1.56□□□□□ -2.16
LIG4P49917 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.56□□□□□ -2.16
LIG4P49917 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
LIG4P49917 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LIG4P49917 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
LIG4P49917 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
LIG4P49917 Y_RNA.124-201ENST00000363339 93 ntBASIC1.55□□□□□ -2.16
LIG4P49917 Y_RNA.243-201ENST00000364481 109 ntBASIC1.55□□□□□ -2.16
LIG4P49917 MIR513A1-201ENST00000385138 129 ntBASIC1.55□□□□□ -2.16
LIG4P49917 SNORD78.2-201ENST00000391076 69 ntBASIC1.55□□□□□ -2.16
LIG4P49917 RNU11-5P-201ENST00000391216 129 ntBASIC1.55□□□□□ -2.16
LIG4P49917 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.55□□□□□ -2.16
LIG4P49917 AC236972.2-201ENST00000434979 310 ntBASIC1.55□□□□□ -2.16
LIG4P49917 AC027119.1-201ENST00000440877 241 ntBASIC1.55□□□□□ -2.16
LIG4P49917 SUMO1P2-201ENST00000452524 304 ntBASIC1.55□□□□□ -2.16
LIG4P49917 AC055872.1-201ENST00000570978 278 ntBASIC1.55□□□□□ -2.16
LIG4P49917 Y_RNA.804-201ENST00000615262 101 ntBASIC1.55□□□□□ -2.16
LIG4P49917 AC004467.1-201ENST00000615678 330 ntBASIC1.55□□□□□ -2.16
LIG4P49917 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LIG4P49917 SNORD33-201ENST00000362761 85 ntBASIC1.54□□□□□ -2.16
LIG4P49917 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
LIG4P49917 Y_RNA.146-201ENST00000363549 102 ntBASIC1.54□□□□□ -2.16
LIG4P49917 Y_RNA.428-201ENST00000384078 102 ntBASIC1.54□□□□□ -2.16
LIG4P49917 RNU6-376P-201ENST00000384731 106 ntBASIC1.54□□□□□ -2.16
LIG4P49917 SNORA12.1-201ENST00000390873 148 ntBASIC1.54□□□□□ -2.16
LIG4P49917 AL034345.1-201ENST00000407768 123 ntBASIC1.54□□□□□ -2.16
LIG4P49917 AL137792.2-201ENST00000443484 235 ntBASIC1.54□□□□□ -2.16
LIG4P49917 CHEK2P4-201ENST00000450340 246 ntBASIC1.54□□□□□ -2.16
LIG4P49917 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
LIG4P49917 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
LIG4P49917 RNU6-1012P-201ENST00000516606 109 ntBASIC1.54□□□□□ -2.16
LIG4P49917 SNORD116.3-201ENST00000517176 78 ntBASIC1.54□□□□□ -2.16
LIG4P49917 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
LIG4P49917 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
LIG4P49917 MIR3937-201ENST00000580135 106 ntBASIC1.54□□□□□ -2.16
LIG4P49917 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
LIG4P49917 AL021879.1-201ENST00000611756 288 ntBASIC1.54□□□□□ -2.16
LIG4P49917 AC040896.1-201ENST00000613819 479 ntBASIC1.54□□□□□ -2.16
LIG4P49917 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
LIG4P49917 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
LIG4P49917 Y_RNA.58-201ENST00000362807 102 ntBASIC1.53□□□□□ -2.16
LIG4P49917 Y_RNA.154-201ENST00000363624 102 ntBASIC1.53□□□□□ -2.16
LIG4P49917 RNY3P1-201ENST00000365085 102 ntBASIC1.53□□□□□ -2.16
LIG4P49917 RNY3-201ENST00000365484 102 ntBASIC1.53□□□□□ -2.16
LIG4P49917 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.53□□□□□ -2.16
LIG4P49917 RNU6-708P-201ENST00000384217 107 ntBASIC1.53□□□□□ -2.16
LIG4P49917 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
LIG4P49917 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
LIG4P49917 AC091021.1-201ENST00000468051 388 ntBASIC1.53□□□□□ -2.16
LIG4P49917 RNU6-1278P-201ENST00000516130 107 ntBASIC1.53□□□□□ -2.16
LIG4P49917 RNU2-12P-201ENST00000517216 168 ntBASIC1.53□□□□□ -2.16
LIG4P49917 AC006600.1-201ENST00000572529 153 ntBASIC1.53□□□□□ -2.16
LIG4P49917 AP001094.1-201ENST00000579805 193 ntBASIC1.53□□□□□ -2.16
LIG4P49917 AC011476.5-201ENST00000615594 130 ntBASIC1.53□□□□□ -2.16
LIG4P49917 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
LIG4P49917 AC127459.3-201ENST00000624328 466 ntBASIC1.53□□□□□ -2.16
LIG4P49917 RNU6-1115P-201ENST00000362490 106 ntBASIC1.52□□□□□ -2.17
LIG4P49917 RNA5SP259-201ENST00000365541 109 ntBASIC1.52□□□□□ -2.17
LIG4P49917 STAG3L5P-204ENST00000443759 179 ntBASIC1.52□□□□□ -2.17
LIG4P49917 PGBD4P5-201ENST00000445958 426 ntBASIC1.52□□□□□ -2.17
LIG4P49917 AC009474.2-201ENST00000451383 136 ntBASIC1.52□□□□□ -2.17
LIG4P49917 MTND3P22-201ENST00000510932 243 ntBASIC1.52□□□□□ -2.17
LIG4P49917 MIR4659A-201ENST00000580269 81 ntBASIC1.52□□□□□ -2.17
LIG4P49917 VN1R91P-201ENST00000594377 169 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms