Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 Y_RNA.605-201ENST00000410577 105 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 MTCO2P27-201ENST00000420740 428 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 AC018865.2-201ENST00000423631 129 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 RNU6-408P-201ENST00000515910 100 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 RNU6-699P-201ENST00000517081 110 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 SUMO2P16-201ENST00000519475 264 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.49□□□□□ -2.17
ERCC2P18074 AP001094.1-201ENST00000579805 193 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 AL365434.2-201ENST00000607979 234 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 AL021879.1-201ENST00000611756 288 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 AC040896.1-201ENST00000613819 479 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 AL121890.5-201ENST00000620848 304 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 MIR6079-201ENST00000635807 62 ntBASIC1.49□□□□□ -2.17
ERCC2P18074 RNU6-1040P-201ENST00000383974 107 ntBASIC1.48□□□□□ -2.17
ERCC2P18074 RNU6-926P-201ENST00000384075 107 ntBASIC1.48□□□□□ -2.17
ERCC2P18074 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
ERCC2P18074 AL135790.2-201ENST00000437701 267 ntBASIC1.48□□□□□ -2.17
ERCC2P18074 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.48□□□□□ -2.17
ERCC2P18074 SNORD19B-201ENST00000459623 84 ntBASIC1.48□□□□□ -2.17
ERCC2P18074 Y_RNA.804-201ENST00000615262 101 ntBASIC1.48□□□□□ -2.17
ERCC2P18074 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
ERCC2P18074 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
ERCC2P18074 Y_RNA.58-201ENST00000362807 102 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 Y_RNA.154-201ENST00000363624 102 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 RNY3P1-201ENST00000365085 102 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 RNY3-201ENST00000365484 102 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 AL034345.1-201ENST00000407768 123 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.47□□□□□ -2.17
ERCC2P18074 AC096644.2-201ENST00000429278 159 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 AC099799.1-201ENST00000439809 192 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.47□□□□□ -2.17
ERCC2P18074 RNA5SP458-201ENST00000516188 119 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 RPL21P9-201ENST00000556149 474 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 AL078604.3-201ENST00000615580 211 ntBASIC1.47□□□□□ -2.17
ERCC2P18074 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
ERCC2P18074 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
ERCC2P18074 U8.1-201ENST00000362843 134 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 Y_RNA.187-201ENST00000363918 113 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 RNU6-1310P-201ENST00000384153 107 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.46□□□□□ -2.18
ERCC2P18074 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.46□□□□□ -2.18
ERCC2P18074 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.46□□□□□ -2.18
ERCC2P18074 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 PGBD4P5-201ENST00000445958 426 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 RNU7-152P-201ENST00000458982 64 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.46□□□□□ -2.18
ERCC2P18074 AC005828.6-201ENST00000606610 232 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 U2.1-201ENST00000618978 145 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 AC138305.3-201ENST00000624988 240 ntBASIC1.46□□□□□ -2.18
ERCC2P18074 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
ERCC2P18074 Y_RNA.124-201ENST00000363339 93 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 Y_RNA.140-201ENST00000363474 103 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 RNU6-961P-201ENST00000363893 105 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 Y_RNA.463-201ENST00000384271 102 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 MIR628-201ENST00000385229 95 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 MIR873-201ENST00000401120 77 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 SNX2P2-201ENST00000424553 323 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.45□□□□□ -2.18
ERCC2P18074 AC236972.2-201ENST00000434979 310 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 MTATP6P23-201ENST00000440153 476 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 AL137792.2-201ENST00000443484 235 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 STAG3L5P-204ENST00000443759 179 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.45□□□□□ -2.18
ERCC2P18074 AC091021.1-201ENST00000468051 388 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 MTND3P22-201ENST00000510932 243 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.45□□□□□ -2.18
ERCC2P18074 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.45□□□□□ -2.18
ERCC2P18074 AL162424.1-201ENST00000602325 221 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 AC004467.1-201ENST00000615678 330 ntBASIC1.45□□□□□ -2.18
ERCC2P18074 Y_RNA.146-201ENST00000363549 102 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 Y_RNA.243-201ENST00000364481 109 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.44□□□□□ -2.18
ERCC2P18074 RNY3P4-201ENST00000384428 101 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 RNU6-376P-201ENST00000384731 106 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 RNU11-5P-201ENST00000391216 129 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 RNU4-62P-201ENST00000410125 130 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 CHEK2P4-201ENST00000450340 246 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 AC023442.1-201ENST00000531247 422 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 AC055872.1-201ENST00000570978 278 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 AP000942.3-201ENST00000603702 160 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 AC073349.3-201ENST00000617616 186 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 AC127459.3-201ENST00000624328 466 ntBASIC1.44□□□□□ -2.18
ERCC2P18074 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.43□□□□□ -2.18
ERCC2P18074 RNU4-73P-201ENST00000363164 141 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 Y_RNA.267-201ENST00000364679 109 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 Y_RNA.428-201ENST00000384078 102 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 RNU6-708P-201ENST00000384217 107 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 AF228730.4-201ENST00000421457 183 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 MTND4LP11-201ENST00000422184 280 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 FCF1P4-201ENST00000448326 183 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
ERCC2P18074 SNORD116.3-201ENST00000517176 78 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms