Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-522P-201ENST00000364497 107 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNU4-76P-201ENST00000364509 141 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-793P-201ENST00000384233 104 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 Y_RNA.530-201ENST00000384587 101 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-373P-201ENST00000411247 98 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 PCNPP5-201ENST00000452246 481 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 LINC01399-202ENST00000458450 244 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.52□□□□□ -2.33
COL4A2P08572 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.52□□□□□ -2.33
COL4A2P08572 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-1281P-201ENST00000516223 105 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNA5SP168-201ENST00000516642 112 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNA5SP454-201ENST00000517231 127 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AK6P2-201ENST00000549020 471 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC008873.1-201ENST00000625051 138 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 MIR1321-201ENST00000637766 79 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-1252P-201ENST00000363054 104 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 Y_RNA.100-201ENST00000363141 102 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 SNORD114-24-201ENST00000365029 72 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 RNU6-596P-201ENST00000365395 98 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 Y_RNA.372-201ENST00000365599 102 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 MIR514A2-201ENST00000385131 88 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 MIR514A3-201ENST00000385132 88 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AL451046.2-201ENST00000403074 277 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 RNA5SP25-201ENST00000410815 110 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.51□□□□□ -2.33
COL4A2P08572 RPL30P10-201ENST00000488148 337 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AC105758.1-201ENST00000506038 399 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 SNORA31.2-201ENST00000516019 134 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 RNU6-107P-201ENST00000516643 102 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AC026407.1-201ENST00000518369 204 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.51□□□□□ -2.33
COL4A2P08572 AC023157.2-201ENST00000540596 141 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AC027288.2-201ENST00000553028 243 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AC245505.1-201ENST00000556398 224 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AL357312.1-201ENST00000603879 298 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 AL138726.1-201ENST00000614873 333 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 FAM157A-202ENST00000615155 405 ntBASIC0.51□□□□□ -2.33
COL4A2P08572 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.51□□□□□ -2.33
COL4A2P08572 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.184-201ENST00000363884 108 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 RNU6-1013P-201ENST00000384180 107 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.490-201ENST00000384413 102 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MIR608-201ENST00000384820 100 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MIR660-201ENST00000385235 97 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 RNA5SP63-201ENST00000391225 112 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 RNA5SP504-201ENST00000410676 117 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.615-201ENST00000410769 117 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 Z98949.2-201ENST00000440996 144 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 DAP3P1-201ENST00000441522 278 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A2P08572 AC074133.1-201ENST00000515696 183 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 RNA5SP20-201ENST00000515976 84 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 ACA64.5-201ENST00000516207 127 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 AL121579.1-201ENST00000555129 305 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 AC012557.2-201ENST00000605919 418 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MIR6759-201ENST00000638110 65 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.194-201ENST00000363985 102 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 SNORA2.2-201ENST00000365473 135 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.402-201ENST00000383972 102 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.415-201ENST00000384012 112 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 SNORA80D-201ENST00000384488 135 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MIR10B-201ENST00000385011 110 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 SNORD12-201ENST00000391002 90 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 U8.16-201ENST00000391279 133 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MIR891A-201ENST00000401237 79 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 MTATP6P13-201ENST00000438531 667 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.5□□□□□ -2.33
COL4A2P08572 RPS26P48-201ENST00000491713 339 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 AC093303.1-201ENST00000514549 295 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 SNORD79.1-201ENST00000516069 84 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 RNU6-566P-201ENST00000516790 107 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 AP002001.1-203ENST00000534002 267 ntBASIC0.5□□□□□ -2.33
COL4A2P08572 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A2P08572 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.5□□□□□ -2.33
COL4A2P08572 Y_RNA.2-201ENST00000362330 96 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 SNORD114-7-201ENST00000362520 77 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 Y_RNA.51-201ENST00000362725 102 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNY3P3-201ENST00000363816 102 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 Y_RNA.256-201ENST00000364594 104 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU6-505P-201ENST00000384427 107 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 Y_RNA.533-201ENST00000384596 114 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU6-159P-201ENST00000391080 106 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNA5SP482-201ENST00000391269 118 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 MIR1912-201ENST00000410389 80 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU2-70P-201ENST00000410718 179 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 AC243428.1-201ENST00000421099 264 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 AC002429.1-201ENST00000437672 148 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU6-506P-201ENST00000516553 94 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU6-922P-201ENST00000516753 99 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU6-341P-201ENST00000516973 96 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 RNU7-172P-201ENST00000517125 64 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 MIR5695-201ENST00000579717 85 ntBASIC0.49□□□□□ -2.33
COL4A2P08572 AC073349.3-201ENST00000617616 186 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 262.1 ms