Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MIR7111-201ENST00000619751 72 ntBASIC0□□□□□ -2.41
CTSDP07339 MIR330-201ENST00000362196 94 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 SNORA27.1-201ENST00000362604 124 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CTSDP07339 MIR516B2-201ENST00000385190 85 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 MIR136-201ENST00000385207 82 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 MIR1302-7-201ENST00000408841 72 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.01□□□□□ -2.41
CTSDP07339 RPS3AP17-201ENST00000472594 777 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 SNORA19.2-201ENST00000516013 114 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 RNU6-107P-201ENST00000516643 102 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.01□□□□□ -2.41
CTSDP07339 AP003327.1-201ENST00000529684 127 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.01□□□□□ -2.41
CTSDP07339 MIR3913-1-201ENST00000577744 102 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AC100830.2-201ENST00000581636 240 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 PIGPP4-201ENST00000584447 307 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AL121757.2-201ENST00000611223 313 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AC009248.2-201ENST00000619826 254 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AF246928.1-201ENST00000623768 87 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 AC079248.2-201ENST00000623779 326 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
CTSDP07339 RNU6-553P-201ENST00000364047 96 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.02□□□□□ -2.41
CTSDP07339 MIR518A1-201ENST00000385068 85 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 MTCYBP4-201ENST00000401524 249 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 RNU6-584P-201ENST00000410350 95 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 SNORD71-201ENST00000411292 86 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.02□□□□□ -2.41
CTSDP07339 AC005534.2-201ENST00000431047 433 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 MTND1P4-201ENST00000435196 415 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AL353572.1-201ENST00000442490 417 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AL137792.2-201ENST00000443484 235 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.02□□□□□ -2.41
CTSDP07339 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.02□□□□□ -2.41
CTSDP07339 RNU4-77P-201ENST00000516692 156 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 RNU6-232P-201ENST00000517144 64 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.02□□□□□ -2.41
CTSDP07339 UBL5P4-201ENST00000562584 236 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AC005730.3-201ENST00000583067 366 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AL136370.1-201ENST00000608166 691 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 MIR8087-201ENST00000612745 78 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AL354950.2-201ENST00000617939 290 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 AC078938.1-201ENST00000620993 318 ntBASIC-0.02□□□□□ -2.41
CTSDP07339 RNU4-21P-201ENST00000362802 126 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 SNORD68-201ENST00000363214 84 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 AC117470.1-201ENST00000381974 330 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 RNU6-815P-201ENST00000384080 113 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 RNA5SP95-201ENST00000410319 137 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 RNU6-613P-201ENST00000410412 108 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 AL358934.1-201ENST00000432346 324 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 ELOCP24-201ENST00000456370 334 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.03□□□□□ -2.41
CTSDP07339 AC093534.1-201ENST00000504977 132 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.03□□□□□ -2.41
CTSDP07339 SNORA25.12-201ENST00000516202 82 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 SNORA18.7-201ENST00000516910 131 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 MIR3612-201ENST00000579753 87 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 AL355073.2-201ENST00000612106 557 ntBASIC-0.03□□□□□ -2.41
CTSDP07339 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
CTSDP07339 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 U8.5-201ENST00000364528 136 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 MIR520H-201ENST00000385126 88 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 SNORA40.8-201ENST00000411034 126 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.04□□□□□ -2.42
CTSDP07339 RPL30P16-201ENST00000419341 429 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.04□□□□□ -2.42
CTSDP07339 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.04□□□□□ -2.42
CTSDP07339 EIF1P4-201ENST00000572664 335 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 AC127459.3-201ENST00000624328 466 ntBASIC-0.04□□□□□ -2.42
CTSDP07339 RNA5SP517-201ENST00000364724 117 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 RNU6-117P-201ENST00000365415 107 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 RNY3P10-201ENST00000384764 102 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 MIR1197-201ENST00000408818 88 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 SNORD83.1-201ENST00000411362 77 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.05□□□□□ -2.42
CTSDP07339 RNU7-125P-201ENST00000458760 62 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 MIR2115-201ENST00000516657 100 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 RNA5SP480-201ENST00000516840 109 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 AC069113.3-201ENST00000521019 150 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 MTND2P38-201ENST00000522536 667 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 AL118558.2-201ENST00000556294 238 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 MIR4768-201ENST00000585270 74 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 MIR4251-201ENST00000635819 61 ntBASIC-0.05□□□□□ -2.42
CTSDP07339 SNORA42.1-201ENST00000363515 137 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 SNORD114-26-201ENST00000363543 72 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms