Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC055872.1-201ENST00000570978 278 ntBASIC1.69□□□□□ -2.14
VTNP04004 MIR5094-201ENST00000578766 85 ntBASIC1.69□□□□□ -2.14
VTNP04004 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.69□□□□□ -2.14
VTNP04004 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.69□□□□□ -2.14
VTNP04004 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.69□□□□□ -2.14
VTNP04004 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VTNP04004 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
VTNP04004 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
VTNP04004 Y_RNA.143-201ENST00000363520 106 ntBASIC1.68□□□□□ -2.14
VTNP04004 Y_RNA.158-201ENST00000363651 101 ntBASIC1.68□□□□□ -2.14
VTNP04004 RNU1-96P-201ENST00000364163 162 ntBASIC1.68□□□□□ -2.14
VTNP04004 SNORA33.2-201ENST00000365413 134 ntBASIC1.68□□□□□ -2.14
VTNP04004 RNU6-639P-201ENST00000384074 107 ntBASIC1.68□□□□□ -2.14
VTNP04004 RNU6-823P-201ENST00000391042 103 ntBASIC1.68□□□□□ -2.14
VTNP04004 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
VTNP04004 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.68□□□□□ -2.14
VTNP04004 RPL26P26-201ENST00000480251 434 ntBASIC1.68□□□□□ -2.14
VTNP04004 AC093852.1-201ENST00000503587 266 ntBASIC1.68□□□□□ -2.14
VTNP04004 RNU6-1146P-201ENST00000516282 102 ntBASIC1.68□□□□□ -2.14
VTNP04004 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.68□□□□□ -2.14
VTNP04004 AC022254.1-201ENST00000567857 235 ntBASIC1.68□□□□□ -2.14
VTNP04004 AC005786.1-201ENST00000588553 154 ntBASIC1.68□□□□□ -2.14
VTNP04004 AL121655.1-201ENST00000605811 308 ntBASIC1.68□□□□□ -2.14
VTNP04004 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.68□□□□□ -2.14
VTNP04004 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.68□□□□□ -2.14
VTNP04004 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VTNP04004 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VTNP04004 RNU6-454P-201ENST00000364292 107 ntBASIC1.67□□□□□ -2.14
VTNP04004 MIR517C-201ENST00000385103 95 ntBASIC1.67□□□□□ -2.14
VTNP04004 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
VTNP04004 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
VTNP04004 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.67□□□□□ -2.14
VTNP04004 Y_RNA.721-201ENST00000517207 102 ntBASIC1.67□□□□□ -2.14
VTNP04004 AL021879.1-201ENST00000611756 288 ntBASIC1.67□□□□□ -2.14
VTNP04004 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
VTNP04004 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
VTNP04004 snoU2-30.2-201ENST00000362805 70 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNU6-407P-201ENST00000365280 104 ntBASIC1.66□□□□□ -2.14
VTNP04004 AC117470.1-201ENST00000381974 330 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNU6-937P-201ENST00000384325 106 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNA5SP323-201ENST00000391094 133 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNA5SP467-201ENST00000391274 118 ntBASIC1.66□□□□□ -2.14
VTNP04004 MRPL35P1-201ENST00000404272 572 ntBASIC1.66□□□□□ -2.14
VTNP04004 AL590004.1-201ENST00000405321 300 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNU6-1186P-201ENST00000410429 97 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNA5SP100-201ENST00000410903 110 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNU6-321P-201ENST00000410912 106 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNA5SP59-201ENST00000410922 110 ntBASIC1.66□□□□□ -2.14
VTNP04004 AC009310.1-201ENST00000414414 451 ntBASIC1.66□□□□□ -2.14
VTNP04004 RPEP5-201ENST00000441137 268 ntBASIC1.66□□□□□ -2.14
VTNP04004 SNORD65B-201ENST00000459126 73 ntBASIC1.66□□□□□ -2.14
VTNP04004 RPS27P22-201ENST00000478056 241 ntBASIC1.66□□□□□ -2.14
VTNP04004 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.66□□□□□ -2.14
VTNP04004 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.66□□□□□ -2.14
VTNP04004 RNU6-1137P-201ENST00000517073 99 ntBASIC1.66□□□□□ -2.14
VTNP04004 Y_RNA.715-201ENST00000517082 110 ntBASIC1.66□□□□□ -2.14
VTNP04004 AC022616.4-201ENST00000522985 181 ntBASIC1.66□□□□□ -2.14
VTNP04004 AC023157.2-201ENST00000540596 141 ntBASIC1.66□□□□□ -2.14
VTNP04004 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.66□□□□□ -2.14
VTNP04004 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
VTNP04004 MIR4680-201ENST00000580906 66 ntBASIC1.66□□□□□ -2.14
VTNP04004 AC006380.1-201ENST00000603598 186 ntBASIC1.66□□□□□ -2.14
VTNP04004 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.66□□□□□ -2.14
VTNP04004 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.66□□□□□ -2.14
VTNP04004 MIR338-201ENST00000636369 67 ntBASIC1.66□□□□□ -2.14
VTNP04004 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VTNP04004 Y_RNA.101-201ENST00000363154 102 ntBASIC1.65□□□□□ -2.15
VTNP04004 RNU6-324P-201ENST00000363957 106 ntBASIC1.65□□□□□ -2.15
VTNP04004 Y_RNA.287-201ENST00000364853 94 ntBASIC1.65□□□□□ -2.15
VTNP04004 RNU6-1175P-201ENST00000365200 107 ntBASIC1.65□□□□□ -2.15
VTNP04004 Y_RNA.455-201ENST00000384230 98 ntBASIC1.65□□□□□ -2.15
VTNP04004 Y_RNA.551-201ENST00000384661 102 ntBASIC1.65□□□□□ -2.15
VTNP04004 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
VTNP04004 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.65□□□□□ -2.15
VTNP04004 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
VTNP04004 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
VTNP04004 AC005840.1-201ENST00000498412 377 ntBASIC1.65□□□□□ -2.15
VTNP04004 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.65□□□□□ -2.15
VTNP04004 RNU6-155P-201ENST00000516347 100 ntBASIC1.65□□□□□ -2.15
VTNP04004 RNU6-1046P-201ENST00000516538 107 ntBASIC1.65□□□□□ -2.15
VTNP04004 RNU7-110P-201ENST00000516891 62 ntBASIC1.65□□□□□ -2.15
VTNP04004 SNORA31.24-201ENST00000517232 57 ntBASIC1.65□□□□□ -2.15
VTNP04004 MIR4713-201ENST00000582691 75 ntBASIC1.65□□□□□ -2.15
VTNP04004 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
VTNP04004 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
VTNP04004 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
VTNP04004 PART1_1.1-201ENST00000611761 217 ntBASIC1.65□□□□□ -2.15
VTNP04004 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.65□□□□□ -2.15
VTNP04004 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VTNP04004 SNORA33-201ENST00000363664 130 ntBASIC1.64□□□□□ -2.15
VTNP04004 Y_RNA.326-201ENST00000365176 113 ntBASIC1.64□□□□□ -2.15
VTNP04004 SNORA20B-201ENST00000384220 132 ntBASIC1.64□□□□□ -2.15
VTNP04004 MIR1252-201ENST00000408861 65 ntBASIC1.64□□□□□ -2.15
VTNP04004 RNU6-130P-201ENST00000411112 103 ntBASIC1.64□□□□□ -2.15
VTNP04004 AC005002.2-201ENST00000438228 269 ntBASIC1.64□□□□□ -2.15
VTNP04004 AC010598.1-201ENST00000510378 103 ntBASIC1.64□□□□□ -2.15
VTNP04004 RNY3P15-201ENST00000516297 97 ntBASIC1.64□□□□□ -2.15
VTNP04004 RNU6-764P-201ENST00000516396 105 ntBASIC1.64□□□□□ -2.15
VTNP04004 RNU1-92P-201ENST00000517017 135 ntBASIC1.64□□□□□ -2.15
VTNP04004 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms