Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 Y_RNA.358-201ENST00000365491 99 ntBASIC1.24□□□□□ -2.21
MMP1P03956 Y_RNA.387-201ENST00000383918 102 ntBASIC1.24□□□□□ -2.21
MMP1P03956 RNU6-1145P-201ENST00000384246 107 ntBASIC1.24□□□□□ -2.21
MMP1P03956 RNU6-1297P-201ENST00000384415 104 ntBASIC1.24□□□□□ -2.21
MMP1P03956 MIR559-201ENST00000385188 96 ntBASIC1.24□□□□□ -2.21
MMP1P03956 RNY4P36-201ENST00000391116 96 ntBASIC1.24□□□□□ -2.21
MMP1P03956 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.24□□□□□ -2.21
MMP1P03956 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
MMP1P03956 AC092423.1-201ENST00000430165 186 ntBASIC1.24□□□□□ -2.21
MMP1P03956 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.24□□□□□ -2.21
MMP1P03956 ELOCP24-201ENST00000456370 334 ntBASIC1.24□□□□□ -2.21
MMP1P03956 AC099513.1-201ENST00000490423 301 ntBASIC1.24□□□□□ -2.21
MMP1P03956 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.24□□□□□ -2.21
MMP1P03956 AC022493.2-201ENST00000506122 481 ntBASIC1.24□□□□□ -2.21
MMP1P03956 Y_RNA.683-201ENST00000516508 93 ntBASIC1.24□□□□□ -2.21
MMP1P03956 Y_RNA.702-201ENST00000516843 96 ntBASIC1.24□□□□□ -2.21
MMP1P03956 Y_RNA.718-201ENST00000517110 102 ntBASIC1.24□□□□□ -2.21
MMP1P03956 MIR5690-201ENST00000583739 73 ntBASIC1.24□□□□□ -2.21
MMP1P03956 AC084781.2-201ENST00000615568 161 ntBASIC1.24□□□□□ -2.21
MMP1P03956 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.24□□□□□ -2.21
MMP1P03956 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.24□□□□□ -2.21
MMP1P03956 AC112487.2-201ENST00000637950 304 ntBASIC1.24□□□□□ -2.21
MMP1P03956 SNORD33-201ENST00000362761 85 ntBASIC1.23□□□□□ -2.21
MMP1P03956 snoU2-30.2-201ENST00000362805 70 ntBASIC1.23□□□□□ -2.21
MMP1P03956 Y_RNA.70-201ENST00000362886 110 ntBASIC1.23□□□□□ -2.21
MMP1P03956 Y_RNA.577-201ENST00000384794 101 ntBASIC1.23□□□□□ -2.21
MMP1P03956 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MMP1P03956 ELOCP21-201ENST00000412558 336 ntBASIC1.23□□□□□ -2.21
MMP1P03956 MRPS18CP6-201ENST00000423587 223 ntBASIC1.23□□□□□ -2.21
MMP1P03956 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.23□□□□□ -2.21
MMP1P03956 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.23□□□□□ -2.21
MMP1P03956 RPL23AP50-201ENST00000434149 455 ntBASIC1.23□□□□□ -2.21
MMP1P03956 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.23□□□□□ -2.21
MMP1P03956 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
MMP1P03956 RPL30P15-201ENST00000457129 321 ntBASIC1.23□□□□□ -2.21
MMP1P03956 Y_RNA.653-201ENST00000459091 95 ntBASIC1.23□□□□□ -2.21
MMP1P03956 Y_RNA.632-201ENST00000459189 102 ntBASIC1.23□□□□□ -2.21
MMP1P03956 RNU7-87P-201ENST00000459343 62 ntBASIC1.23□□□□□ -2.21
MMP1P03956 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.23□□□□□ -2.21
MMP1P03956 RNU6-470P-201ENST00000515954 104 ntBASIC1.23□□□□□ -2.21
MMP1P03956 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.23□□□□□ -2.21
MMP1P03956 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
MMP1P03956 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.23□□□□□ -2.21
MMP1P03956 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.23□□□□□ -2.21
MMP1P03956 AP001094.1-201ENST00000579805 193 ntBASIC1.23□□□□□ -2.21
MMP1P03956 PRR13P7-201ENST00000605538 430 ntBASIC1.23□□□□□ -2.21
MMP1P03956 AL121890.5-201ENST00000620848 304 ntBASIC1.23□□□□□ -2.21
MMP1P03956 U6.108-201ENST00000637764 58 ntBASIC1.23□□□□□ -2.21
MMP1P03956 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
MMP1P03956 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.23□□□□□ -2.21
MMP1P03956 SNORA72.2-201ENST00000365028 127 ntBASIC1.22□□□□□ -2.21
MMP1P03956 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
MMP1P03956 RNU6-1009P-201ENST00000390996 107 ntBASIC1.22□□□□□ -2.21
MMP1P03956 MTCYBP4-201ENST00000401524 249 ntBASIC1.22□□□□□ -2.21
MMP1P03956 RNU6-1156P-201ENST00000410365 100 ntBASIC1.22□□□□□ -2.21
MMP1P03956 AF228730.4-201ENST00000421457 183 ntBASIC1.22□□□□□ -2.21
MMP1P03956 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
MMP1P03956 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.22□□□□□ -2.21
MMP1P03956 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.22□□□□□ -2.21
MMP1P03956 RNU7-152P-201ENST00000458982 64 ntBASIC1.22□□□□□ -2.21
MMP1P03956 snoU13.27-201ENST00000459278 104 ntBASIC1.22□□□□□ -2.21
MMP1P03956 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.22□□□□□ -2.21
MMP1P03956 AC105758.1-201ENST00000506038 399 ntBASIC1.22□□□□□ -2.21
MMP1P03956 AC079140.2-201ENST00000506193 142 ntBASIC1.22□□□□□ -2.21
MMP1P03956 RNU6-307P-201ENST00000516743 106 ntBASIC1.22□□□□□ -2.21
MMP1P03956 AP002001.1-203ENST00000534002 267 ntBASIC1.22□□□□□ -2.21
MMP1P03956 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.22□□□□□ -2.21
MMP1P03956 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
MMP1P03956 AC015688.6-201ENST00000577737 104 ntBASIC1.22□□□□□ -2.21
MMP1P03956 LARP7P1-201ENST00000605576 316 ntBASIC1.22□□□□□ -2.21
MMP1P03956 RNY3P11-201ENST00000364153 102 ntBASIC1.21□□□□□ -2.22
MMP1P03956 Y_RNA.356-201ENST00000365475 113 ntBASIC1.21□□□□□ -2.22
MMP1P03956 RNU6-417P-201ENST00000384712 107 ntBASIC1.21□□□□□ -2.22
MMP1P03956 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
MMP1P03956 MIR513A1-201ENST00000385138 129 ntBASIC1.21□□□□□ -2.22
MMP1P03956 RNA5SP467-201ENST00000391274 118 ntBASIC1.21□□□□□ -2.22
MMP1P03956 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
MMP1P03956 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.21□□□□□ -2.22
MMP1P03956 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
MMP1P03956 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.21□□□□□ -2.22
MMP1P03956 MIR2053-201ENST00000459295 91 ntBASIC1.21□□□□□ -2.22
MMP1P03956 SNORD19B-201ENST00000459623 84 ntBASIC1.21□□□□□ -2.22
MMP1P03956 RNU7-128P-201ENST00000517247 62 ntBASIC1.21□□□□□ -2.22
MMP1P03956 AC022868.1-201ENST00000517767 391 ntBASIC1.21□□□□□ -2.22
MMP1P03956 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
MMP1P03956 AC138305.3-201ENST00000624988 240 ntBASIC1.21□□□□□ -2.22
MMP1P03956 RNU6-1301P-201ENST00000362724 104 ntBASIC1.2□□□□□ -2.22
MMP1P03956 Y_RNA.58-201ENST00000362807 102 ntBASIC1.2□□□□□ -2.22
MMP1P03956 Y_RNA.154-201ENST00000363624 102 ntBASIC1.2□□□□□ -2.22
MMP1P03956 RNU5F-3P-201ENST00000363767 117 ntBASIC1.2□□□□□ -2.22
MMP1P03956 Y_RNA.259-201ENST00000364619 101 ntBASIC1.2□□□□□ -2.22
MMP1P03956 RNY3P1-201ENST00000365085 102 ntBASIC1.2□□□□□ -2.22
MMP1P03956 RNU6-1240P-201ENST00000365155 104 ntBASIC1.2□□□□□ -2.22
MMP1P03956 RNY3-201ENST00000365484 102 ntBASIC1.2□□□□□ -2.22
MMP1P03956 MIR515-2-201ENST00000384883 83 ntBASIC1.2□□□□□ -2.22
MMP1P03956 MIR515-1-201ENST00000384884 83 ntBASIC1.2□□□□□ -2.22
MMP1P03956 Y_RNA.592-201ENST00000410274 109 ntBASIC1.2□□□□□ -2.22
MMP1P03956 AC093019.1-201ENST00000443135 252 ntBASIC1.2□□□□□ -2.22
MMP1P03956 AC073910.1-201ENST00000445047 438 ntBASIC1.2□□□□□ -2.22
MMP1P03956 AC074290.1-201ENST00000448883 135 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms