Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AL365203.2-201ENST00000423444 196 ntBASIC0.03□□□□□ -2.4
APOA1P02647 MTCO1P20-201ENST00000425366 358 ntBASIC0.03□□□□□ -2.4
APOA1P02647 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.03□□□□□ -2.4
APOA1P02647 PCMTD1P1-201ENST00000455560 355 ntBASIC0.03□□□□□ -2.4
APOA1P02647 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.03□□□□□ -2.4
APOA1P02647 AC134698.4-201ENST00000523451 826 ntBASIC0.03□□□□□ -2.4
APOA1P02647 AC022523.2-201ENST00000561045 150 ntBASIC0.03□□□□□ -2.4
APOA1P02647 MIR4711-201ENST00000578274 70 ntBASIC0.03□□□□□ -2.4
APOA1P02647 POLR3GP2-201ENST00000588366 668 ntBASIC0.03□□□□□ -2.4
APOA1P02647 AL078603.1-201ENST00000603824 313 ntBASIC0.03□□□□□ -2.4
APOA1P02647 AL355073.2-201ENST00000612106 557 ntBASIC0.03□□□□□ -2.4
APOA1P02647 MIR6504-201ENST00000613520 61 ntBASIC0.03□□□□□ -2.4
APOA1P02647 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
APOA1P02647 SNORD44.1-201ENST00000363202 61 ntBASIC0.02□□□□□ -2.41
APOA1P02647 Y_RNA.169-201ENST00000363745 96 ntBASIC0.02□□□□□ -2.41
APOA1P02647 MIR1302-7-201ENST00000408841 72 ntBASIC0.02□□□□□ -2.41
APOA1P02647 RNA5SP247-201ENST00000411181 105 ntBASIC0.02□□□□□ -2.41
APOA1P02647 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.02□□□□□ -2.41
APOA1P02647 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.02□□□□□ -2.41
APOA1P02647 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.02□□□□□ -2.41
APOA1P02647 MTND1P4-201ENST00000435196 415 ntBASIC0.02□□□□□ -2.41
APOA1P02647 AC046134.1-201ENST00000514454 666 ntBASIC0.02□□□□□ -2.41
APOA1P02647 AL359757.2-201ENST00000624309 274 ntBASIC0.02□□□□□ -2.41
APOA1P02647 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.02□□□□□ -2.41
APOA1P02647 RNU6-1264P-201ENST00000383891 107 ntBASIC0.01□□□□□ -2.41
APOA1P02647 RNU6-1103P-201ENST00000384150 107 ntBASIC0.01□□□□□ -2.41
APOA1P02647 RNU6-613P-201ENST00000410412 108 ntBASIC0.01□□□□□ -2.41
APOA1P02647 Y_RNA.621-201ENST00000411065 96 ntBASIC0.01□□□□□ -2.41
APOA1P02647 NDUFA4P2-201ENST00000489989 244 ntBASIC0.01□□□□□ -2.41
APOA1P02647 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.01□□□□□ -2.41
APOA1P02647 SNORA25.12-201ENST00000516202 82 ntBASIC0.01□□□□□ -2.41
APOA1P02647 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.01□□□□□ -2.41
APOA1P02647 MIR3612-201ENST00000579753 87 ntBASIC0.01□□□□□ -2.41
APOA1P02647 AC012433.1-201ENST00000588916 398 ntBASIC0.01□□□□□ -2.41
APOA1P02647 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.01□□□□□ -2.41
APOA1P02647 MIR4251-201ENST00000635819 61 ntBASIC0.01□□□□□ -2.41
APOA1P02647 Y_RNA.167-201ENST00000363735 109 ntBASIC0□□□□□ -2.41
APOA1P02647 U8.5-201ENST00000364528 136 ntBASIC0□□□□□ -2.41
APOA1P02647 AC117470.1-201ENST00000381974 330 ntBASIC0□□□□□ -2.41
APOA1P02647 MIR520F-201ENST00000384824 87 ntBASIC0□□□□□ -2.41
APOA1P02647 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0□□□□□ -2.41
APOA1P02647 SNORD71-201ENST00000411292 86 ntBASIC0□□□□□ -2.41
APOA1P02647 AL390729.2-201ENST00000416137 156 ntBASIC0□□□□□ -2.41
APOA1P02647 ZNF736P8Y-201ENST00000451913 669 ntBASIC0□□□□□ -2.41
APOA1P02647 SNORD123-201ENST00000459473 70 ntBASIC0□□□□□ -2.41
APOA1P02647 Z94722.1-201ENST00000604328 474 ntBASIC0□□□□□ -2.41
APOA1P02647 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
APOA1P02647 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
APOA1P02647 AL591926.4-201ENST00000616895 298 ntBASIC0□□□□□ -2.41
APOA1P02647 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0□□□□□ -2.41
APOA1P02647 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0□□□□□ -2.41
APOA1P02647 MIR924-201ENST00000638017 53 ntBASIC0□□□□□ -2.41
APOA1P02647 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
APOA1P02647 RNU6-369P-201ENST00000362515 102 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 SNORA25.9-201ENST00000365087 128 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 MIR518A1-201ENST00000385068 85 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 MIR873-201ENST00000401120 77 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 MIR936-201ENST00000401264 98 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 MIR1276-201ENST00000408707 83 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 SNORD83.1-201ENST00000411362 77 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.01□□□□□ -2.41
APOA1P02647 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOA1P02647 ELOCP24-201ENST00000456370 334 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.01□□□□□ -2.41
APOA1P02647 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOA1P02647 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.01□□□□□ -2.41
APOA1P02647 AC027449.1-201ENST00000608890 407 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 AC099654.12-201ENST00000639868 649 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 AL589743.1-201ENST00000551932 2712 ntBASIC-0.01□□□□□ -2.41
APOA1P02647 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.01□□□□□ -2.41
APOA1P02647 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 RNU1-133P-201ENST00000364867 167 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 RNU6-128P-201ENST00000383976 107 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 RNU6-679P-201ENST00000391003 106 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 ACA59.1-201ENST00000515966 143 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 MIR2115-201ENST00000516657 100 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 RNU6-63P-201ENST00000516690 95 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 MIR4762-201ENST00000585261 75 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 AF250324.2-201ENST00000608299 610 ntBASIC-0.02□□□□□ -2.41
APOA1P02647 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
APOA1P02647 RNA5SP193-201ENST00000410353 107 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 SNORA40.8-201ENST00000411034 126 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 AL590632.1-201ENST00000424289 371 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 AC073261.1-201ENST00000429409 121 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 RNU7-175P-201ENST00000515915 61 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 RNU6-977P-201ENST00000516411 103 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 AC091931.1-201ENST00000623488 728 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 U6.115-201ENST00000636045 103 ntBASIC-0.03□□□□□ -2.41
APOA1P02647 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 RNA5SP517-201ENST00000364724 117 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOA1P02647 UQCRBP2-201ENST00000447827 297 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 MTND3P16-201ENST00000452205 344 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 RNA5SP220-201ENST00000516298 104 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 MTND2P38-201ENST00000522536 667 ntBASIC-0.04□□□□□ -2.42
APOA1P02647 AC093023.1-201ENST00000547375 507 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms