Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
UPK1BO75841 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
UPK1BO75841 MTND5P16-201ENST00000460269 1703 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
UPK1BO75841 MIR103A2-201ENST00000362154 78 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 RNU6-833P-201ENST00000363486 107 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 RNY3P3-201ENST00000363816 102 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 RNU6-392P-201ENST00000364926 101 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 MIR329-1-201ENST00000385028 80 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 SNORD99-201ENST00000408612 74 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 AL162725.1-201ENST00000435405 301 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 RNU6-113P-201ENST00000516653 101 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.49□□□□□ -2.33
UPK1BO75841 AC120024.3-201ENST00000603167 156 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 AC108706.1-201ENST00000611053 297 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 7SK.10-201ENST00000621414 298 ntBASIC0.49□□□□□ -2.33
UPK1BO75841 SNORD68-201ENST00000363214 84 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 RNU6-117P-201ENST00000365415 107 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 SNORD116-9-201ENST00000384000 95 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 SNORD116-3-201ENST00000384287 95 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 SNORD116-7-201ENST00000384404 95 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 RNU6-1297P-201ENST00000384415 104 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 SNORD116-5-201ENST00000384462 95 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 RNU6-110P-201ENST00000384508 104 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.48□□□□□ -2.33
UPK1BO75841 USP9YP30-201ENST00000430729 455 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 RPS20P10-201ENST00000451209 253 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 HMGN1P7-201ENST00000491722 313 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 CYCTP-201ENST00000504253 315 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 AC113410.1-201ENST00000505029 247 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 AC114811.1-201ENST00000507207 168 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 RNA5SP458-201ENST00000516188 119 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 AC109810.1-201ENST00000534066 224 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 NBR2-204ENST00000587322 63 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 BNIP3P10-201ENST00000605360 577 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 AC100812.1-201ENST00000607622 580 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 AC093913.1-201ENST00000614178 329 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
UPK1BO75841 AC007014.2-201ENST00000615581 479 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.48□□□□□ -2.33
UPK1BO75841 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
UPK1BO75841 RNU6-842P-201ENST00000384269 107 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 MIR520G-201ENST00000385064 90 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 MIR516B2-201ENST00000385190 85 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 AC004941.2-201ENST00000427009 228 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 EIF1P2-201ENST00000428233 350 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.47□□□□□ -2.33
UPK1BO75841 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.47□□□□□ -2.33
UPK1BO75841 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.47□□□□□ -2.33
UPK1BO75841 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.47□□□□□ -2.33
UPK1BO75841 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 AC090617.3-201ENST00000573670 475 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 AL359821.1-201ENST00000605519 182 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 AC090617.10-201ENST00000624308 134 ntBASIC0.47□□□□□ -2.33
UPK1BO75841 RNU6-1090P-201ENST00000364065 94 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 RNU6-454P-201ENST00000364292 107 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 RNU6-596P-201ENST00000365395 98 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 Y_RNA.498-201ENST00000384460 102 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 MIR873-201ENST00000401120 77 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 MIR1185-1-201ENST00000408598 86 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 RPL23AP50-201ENST00000434149 455 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 RNU7-87P-201ENST00000459343 62 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 RNU7-41P-201ENST00000515917 61 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 Y_RNA.688-201ENST00000516565 95 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.46□□□□□ -2.34
UPK1BO75841 MIR3684-201ENST00000579779 74 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 AC104984.5-201ENST00000586878 94 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 AL590095.2-201ENST00000604136 117 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 SEPT14P17-201ENST00000617978 177 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 MIR6835-201ENST00000621552 64 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 AC024614.3-201ENST00000637860 256 ntBASIC0.46□□□□□ -2.34
UPK1BO75841 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.45□□□□□ -2.34
UPK1BO75841 RNU6-1145P-201ENST00000384246 107 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 Y_RNA.490-201ENST00000384413 102 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 MIR1298-201ENST00000408783 112 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 Y_RNA.621-201ENST00000411065 96 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 AC098869.1-201ENST00000481627 292 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 RNU6-1088P-201ENST00000516850 104 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 AP003716.2-201ENST00000528260 108 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 AL358944.1-201ENST00000528537 144 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.45□□□□□ -2.34
UPK1BO75841 AC018448.1-201ENST00000552843 316 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.45□□□□□ -2.34
UPK1BO75841 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 MIR6128-201ENST00000615528 109 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 MIR6715A-201ENST00000615929 79 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 AC104260.1-201ENST00000616660 539 ntBASIC0.45□□□□□ -2.34
UPK1BO75841 Y_RNA.51-201ENST00000362725 102 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 SNORD114-27-201ENST00000363766 70 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 RNU6-879P-201ENST00000364328 108 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 MIR520C-201ENST00000385005 87 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 MIR452-201ENST00000385020 85 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 RNA5SP511-201ENST00000410487 115 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.44□□□□□ -2.34
UPK1BO75841 DLGAP5P1-201ENST00000430307 464 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 U8.22-201ENST00000459141 133 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 U7.7-201ENST00000459276 60 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 TRMT112P2-201ENST00000512910 132 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 AC022079.1-201ENST00000621546 602 ntBASIC0.44□□□□□ -2.34
UPK1BO75841 AC027279.3-201ENST00000625055 122 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 304.8 ms