Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU6-117P-201ENST00000365415 107 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 MIR196B-201ENST00000384852 84 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 MTCO2P33-201ENST00000402100 465 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNA5SP181-201ENST00000410246 98 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
KDM1AO60341 MTND5P15-201ENST00000434246 349 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 AC104332.1-201ENST00000440471 797 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 AL138752.1-201ENST00000452964 351 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.6□□□□□ -1.99
KDM1AO60341 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.6□□□□□ -1.99
KDM1AO60341 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 U8.19-201ENST00000459095 133 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNA5SP356-201ENST00000515972 94 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNU6-1278P-201ENST00000516130 107 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNU6-1041P-201ENST00000516254 102 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 SNORA81.3-201ENST00000517283 198 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
KDM1AO60341 AL031274.2-201ENST00000599419 203 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 Z83818.1-201ENST00000603584 150 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 AC013791.1-201ENST00000616619 62 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 U6.73-201ENST00000619194 103 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KDM1AO60341 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KDM1AO60341 RNU6-899P-201ENST00000363947 107 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 Y_RNA.262-201ENST00000364641 102 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 RNU6-417P-201ENST00000384712 107 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 MIR518C-201ENST00000384822 101 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 MT-TR-201ENST00000387439 65 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 AL355497.1-201ENST00000406262 551 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.59□□□□□ -1.99
KDM1AO60341 OOSP1P1-201ENST00000423265 274 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 RNU7-141P-201ENST00000459304 62 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.59□□□□□ -1.99
KDM1AO60341 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.59□□□□□ -1.99
KDM1AO60341 RNU6-63P-201ENST00000516690 95 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 RNU7-172P-201ENST00000517125 64 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 AC024405.2-202ENST00000532731 184 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 AL365265.1-201ENST00000621045 234 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 MIR338-201ENST00000636369 67 ntBASIC2.59□□□□□ -1.99
KDM1AO60341 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -1.99
KDM1AO60341 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -2
KDM1AO60341 RNU1-112P-201ENST00000364401 164 ntBASIC2.58□□□□□ -2
KDM1AO60341 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
KDM1AO60341 HSPE1P21-201ENST00000438283 308 ntBASIC2.58□□□□□ -2
KDM1AO60341 AL109933.2-201ENST00000452651 260 ntBASIC2.58□□□□□ -2
KDM1AO60341 Y_RNA.644-201ENST00000459006 113 ntBASIC2.58□□□□□ -2
KDM1AO60341 YWHAEP4-201ENST00000505390 198 ntBASIC2.58□□□□□ -2
KDM1AO60341 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.58□□□□□ -2
KDM1AO60341 Y_RNA.674-201ENST00000516362 113 ntBASIC2.58□□□□□ -2
KDM1AO60341 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
KDM1AO60341 CBX3P4-201ENST00000538909 354 ntBASIC2.58□□□□□ -2
KDM1AO60341 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
KDM1AO60341 MIR5692C2-201ENST00000577959 77 ntBASIC2.58□□□□□ -2
KDM1AO60341 MIR3169-201ENST00000578032 83 ntBASIC2.58□□□□□ -2
KDM1AO60341 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.58□□□□□ -2
KDM1AO60341 AC007229.1-201ENST00000590455 412 ntBASIC2.58□□□□□ -2
KDM1AO60341 MIR548AY-201ENST00000617669 107 ntBASIC2.58□□□□□ -2
KDM1AO60341 AC068647.2-201ENST00000637380 353 ntBASIC2.58□□□□□ -2
KDM1AO60341 AC134026.1-201ENST00000623249 2239 ntBASIC2.57□□□□□ -2
KDM1AO60341 Y_RNA.793-201ENST00000411222 111 ntBASIC2.57□□□□□ -2
KDM1AO60341 AL135786.1-201ENST00000415892 214 ntBASIC2.57□□□□□ -2
KDM1AO60341 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.57□□□□□ -2
KDM1AO60341 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.57□□□□□ -2
KDM1AO60341 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
KDM1AO60341 RNU6-182P-201ENST00000516970 105 ntBASIC2.57□□□□□ -2
KDM1AO60341 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.57□□□□□ -2
KDM1AO60341 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.57□□□□□ -2
KDM1AO60341 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
KDM1AO60341 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.57□□□□□ -2
KDM1AO60341 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.57□□□□□ -2
KDM1AO60341 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.57□□□□□ -2
KDM1AO60341 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KDM1AO60341 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KDM1AO60341 RNU1-58P-201ENST00000362413 163 ntBASIC2.56□□□□□ -2
KDM1AO60341 RNU6-653P-201ENST00000363074 106 ntBASIC2.56□□□□□ -2
KDM1AO60341 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.56□□□□□ -2
KDM1AO60341 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
KDM1AO60341 SNORA40.19-201ENST00000390846 128 ntBASIC2.56□□□□□ -2
KDM1AO60341 AL117342.1-201ENST00000404861 406 ntBASIC2.56□□□□□ -2
KDM1AO60341 AL162725.1-201ENST00000435405 301 ntBASIC2.56□□□□□ -2
KDM1AO60341 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
KDM1AO60341 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.56□□□□□ -2
KDM1AO60341 RNU7-115P-201ENST00000516433 55 ntBASIC2.56□□□□□ -2
KDM1AO60341 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.56□□□□□ -2
KDM1AO60341 AC100767.1-201ENST00000528178 123 ntBASIC2.56□□□□□ -2
KDM1AO60341 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
KDM1AO60341 AC005972.2-201ENST00000604690 348 ntBASIC2.56□□□□□ -2
KDM1AO60341 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
KDM1AO60341 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KDM1AO60341 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
KDM1AO60341 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KDM1AO60341 AC062016.1-201ENST00000355719 319 ntBASIC2.55□□□□□ -2
KDM1AO60341 RNU6-1020P-201ENST00000363684 107 ntBASIC2.55□□□□□ -2
KDM1AO60341 RNU1-96P-201ENST00000364163 162 ntBASIC2.55□□□□□ -2
KDM1AO60341 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms