Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 AC099654.14-201ENST00000638599 341 ntBASIC1.69□□□□□ -2.14
CREB3O43889 RN7SKP101-201ENST00000411376 320 ntBASIC1.68□□□□□ -2.14
CREB3O43889 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
CREB3O43889 SDAD1P3-201ENST00000427380 333 ntBASIC1.68□□□□□ -2.14
CREB3O43889 FCF1P4-201ENST00000448326 183 ntBASIC1.68□□□□□ -2.14
CREB3O43889 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
CREB3O43889 SNORA20.3-201ENST00000516880 132 ntBASIC1.68□□□□□ -2.14
CREB3O43889 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.68□□□□□ -2.14
CREB3O43889 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.68□□□□□ -2.14
CREB3O43889 AC019288.1-201ENST00000557918 224 ntBASIC1.68□□□□□ -2.14
CREB3O43889 AC006380.1-201ENST00000603598 186 ntBASIC1.68□□□□□ -2.14
CREB3O43889 MIR378A-201ENST00000362177 66 ntBASIC1.67□□□□□ -2.14
CREB3O43889 RNU6-199P-201ENST00000362954 107 ntBASIC1.67□□□□□ -2.14
CREB3O43889 RNU6-890P-201ENST00000384121 107 ntBASIC1.67□□□□□ -2.14
CREB3O43889 RNU6-1297P-201ENST00000384415 104 ntBASIC1.67□□□□□ -2.14
CREB3O43889 RNU6-505P-201ENST00000384427 107 ntBASIC1.67□□□□□ -2.14
CREB3O43889 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.67□□□□□ -2.14
CREB3O43889 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.67□□□□□ -2.14
CREB3O43889 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.67□□□□□ -2.14
CREB3O43889 AL358944.1-201ENST00000528537 144 ntBASIC1.67□□□□□ -2.14
CREB3O43889 MIR3683-201ENST00000580847 82 ntBASIC1.67□□□□□ -2.14
CREB3O43889 AC091178.2-201ENST00000584401 117 ntBASIC1.67□□□□□ -2.14
CREB3O43889 RNU6-454P-201ENST00000364292 107 ntBASIC1.66□□□□□ -2.14
CREB3O43889 Y_RNA.243-201ENST00000364481 109 ntBASIC1.66□□□□□ -2.14
CREB3O43889 SNORA12.1-201ENST00000390873 148 ntBASIC1.66□□□□□ -2.14
CREB3O43889 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
CREB3O43889 Y_RNA.605-201ENST00000410577 105 ntBASIC1.66□□□□□ -2.14
CREB3O43889 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.66□□□□□ -2.14
CREB3O43889 AC092991.1-201ENST00000477176 376 ntBASIC1.66□□□□□ -2.14
CREB3O43889 RNU6-408P-201ENST00000515910 100 ntBASIC1.66□□□□□ -2.14
CREB3O43889 RNU6-470P-201ENST00000515954 104 ntBASIC1.66□□□□□ -2.14
CREB3O43889 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
CREB3O43889 AP002001.1-203ENST00000534002 267 ntBASIC1.66□□□□□ -2.14
CREB3O43889 snoU13.31-201ENST00000607291 104 ntBASIC1.66□□□□□ -2.14
CREB3O43889 AC087588.2-201ENST00000617667 426 ntBASIC1.66□□□□□ -2.14
CREB3O43889 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CREB3O43889 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CREB3O43889 RNU6-457P-201ENST00000363999 107 ntBASIC1.65□□□□□ -2.15
CREB3O43889 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.65□□□□□ -2.15
CREB3O43889 RNU6-424P-201ENST00000384367 105 ntBASIC1.65□□□□□ -2.15
CREB3O43889 MIR628-201ENST00000385229 95 ntBASIC1.65□□□□□ -2.15
CREB3O43889 AC138393.2-201ENST00000414742 246 ntBASIC1.65□□□□□ -2.15
CREB3O43889 AC099799.1-201ENST00000439809 192 ntBASIC1.65□□□□□ -2.15
CREB3O43889 RPL30P15-201ENST00000457129 321 ntBASIC1.65□□□□□ -2.15
CREB3O43889 RNA5SP168-201ENST00000516642 112 ntBASIC1.65□□□□□ -2.15
CREB3O43889 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.65□□□□□ -2.15
CREB3O43889 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CREB3O43889 AL355073.2-201ENST00000612106 557 ntBASIC1.65□□□□□ -2.15
CREB3O43889 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.65□□□□□ -2.15
CREB3O43889 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CREB3O43889 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CREB3O43889 RNY3P4-201ENST00000384428 101 ntBASIC1.64□□□□□ -2.15
CREB3O43889 SNORD78.2-201ENST00000391076 69 ntBASIC1.64□□□□□ -2.15
CREB3O43889 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.64□□□□□ -2.15
CREB3O43889 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.64□□□□□ -2.15
CREB3O43889 AL160236.1-201ENST00000556317 195 ntBASIC1.64□□□□□ -2.15
CREB3O43889 AC106754.2-201ENST00000623006 233 ntBASIC1.64□□□□□ -2.15
CREB3O43889 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.63□□□□□ -2.15
CREB3O43889 SNORA1B-201ENST00000362535 133 ntBASIC1.63□□□□□ -2.15
CREB3O43889 RNU6-117P-201ENST00000365415 107 ntBASIC1.63□□□□□ -2.15
CREB3O43889 Y_RNA.384-201ENST00000383909 102 ntBASIC1.63□□□□□ -2.15
CREB3O43889 Y_RNA.474-201ENST00000384341 102 ntBASIC1.63□□□□□ -2.15
CREB3O43889 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.63□□□□□ -2.15
CREB3O43889 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
CREB3O43889 Y_RNA.673-201ENST00000516306 88 ntBASIC1.63□□□□□ -2.15
CREB3O43889 RNU6-911P-201ENST00000516523 104 ntBASIC1.63□□□□□ -2.15
CREB3O43889 RNU6-1291P-201ENST00000516591 104 ntBASIC1.63□□□□□ -2.15
CREB3O43889 MIR4778-201ENST00000577635 80 ntBASIC1.63□□□□□ -2.15
CREB3O43889 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
CREB3O43889 MIR4781-201ENST00000585250 76 ntBASIC1.63□□□□□ -2.15
CREB3O43889 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
CREB3O43889 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
CREB3O43889 Y_RNA.259-201ENST00000364619 101 ntBASIC1.62□□□□□ -2.15
CREB3O43889 Y_RNA.387-201ENST00000383918 102 ntBASIC1.62□□□□□ -2.15
CREB3O43889 AL451046.2-201ENST00000403074 277 ntBASIC1.62□□□□□ -2.15
CREB3O43889 BTF3P4-201ENST00000418852 495 ntBASIC1.62□□□□□ -2.15
CREB3O43889 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.62□□□□□ -2.15
CREB3O43889 AL049830.1-201ENST00000468034 425 ntBASIC1.62□□□□□ -2.15
CREB3O43889 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.62□□□□□ -2.15
CREB3O43889 AC023442.1-201ENST00000531247 422 ntBASIC1.62□□□□□ -2.15
CREB3O43889 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
CREB3O43889 GHRLOS.1-201ENST00000610995 70 ntBASIC1.62□□□□□ -2.15
CREB3O43889 AC004467.1-201ENST00000615678 330 ntBASIC1.62□□□□□ -2.15
CREB3O43889 MIR337-201ENST00000362281 93 ntBASIC1.61□□□□□ -2.15
CREB3O43889 RNU6-490P-201ENST00000362985 107 ntBASIC1.61□□□□□ -2.15
CREB3O43889 Y_RNA.124-201ENST00000363339 93 ntBASIC1.61□□□□□ -2.15
CREB3O43889 Y_RNA.142-201ENST00000363491 102 ntBASIC1.61□□□□□ -2.15
CREB3O43889 RNU6-939P-201ENST00000384634 107 ntBASIC1.61□□□□□ -2.15
CREB3O43889 MIR150-201ENST00000385048 84 ntBASIC1.61□□□□□ -2.15
CREB3O43889 MIR618-201ENST00000385287 98 ntBASIC1.61□□□□□ -2.15
CREB3O43889 RNU5A-5P-201ENST00000411054 116 ntBASIC1.61□□□□□ -2.15
CREB3O43889 CALM2P4-201ENST00000430810 426 ntBASIC1.61□□□□□ -2.15
CREB3O43889 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CREB3O43889 RBMX2P4-201ENST00000441256 376 ntBASIC1.61□□□□□ -2.15
CREB3O43889 HSPE1P13-201ENST00000451143 297 ntBASIC1.61□□□□□ -2.15
CREB3O43889 AC233266.1-201ENST00000454518 96 ntBASIC1.61□□□□□ -2.15
CREB3O43889 AL163540.1-201ENST00000485382 386 ntBASIC1.61□□□□□ -2.15
CREB3O43889 AC105758.1-201ENST00000506038 399 ntBASIC1.61□□□□□ -2.15
CREB3O43889 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
CREB3O43889 RNU6-1096P-201ENST00000517089 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms