Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AC010469.2-201ENST00000496412 480 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AC097462.1-201ENST00000514125 324 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 RNA5SP445-201ENST00000515889 115 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-559P-201ENST00000516151 98 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 RNU7-99P-201ENST00000516271 62 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AC073544.1-201ENST00000600110 1595 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AC113139.1-201ENST00000605049 239 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 MIR8054-201ENST00000620877 86 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 MTND4LP32-201ENST00000636111 270 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 MIR410-201ENST00000362222 80 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 Y_RNA.124-201ENST00000363339 93 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-1031P-201ENST00000384773 107 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 AC018865.2-201ENST00000423631 129 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 MIR2053-201ENST00000459295 91 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-625P-201ENST00000459412 107 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 RPS27P22-201ENST00000478056 241 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-307P-201ENST00000516743 106 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 AC055872.1-201ENST00000570978 278 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 AC005730.3-201ENST00000583067 366 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 AL365434.2-201ENST00000607979 234 ntBASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
SMIM28A0A1B0GU29 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 SNORD33-201ENST00000362761 85 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 MIR559-201ENST00000385188 96 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 Y_RNA.592-201ENST00000410274 109 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 SNORD12B-201ENST00000410433 91 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 PCNPP5-201ENST00000452246 481 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 RPL30P15-201ENST00000457129 321 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 AC010598.1-201ENST00000510378 103 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 AC074133.1-201ENST00000515696 183 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 AL132765.2-201ENST00000610812 351 ntBASIC1.17□□□□□ -2.22
SMIM28A0A1B0GU29 SNORA27.1-201ENST00000362604 124 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 SNORA72.1-201ENST00000363485 129 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 Y_RNA.142-201ENST00000363491 102 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-961P-201ENST00000363893 105 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 Y_RNA.577-201ENST00000384794 101 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-1156P-201ENST00000410365 100 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 RPL30P13-201ENST00000418873 348 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 UBE2V1P7-201ENST00000446395 340 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC136443.5-201ENST00000603741 370 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC005828.6-201ENST00000606610 232 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC084781.2-201ENST00000615568 161 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC006435.5-201ENST00000624486 112 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 U6.115-201ENST00000636045 103 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 MIR1302-1-201ENST00000637932 143 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC018630.2-201ENST00000534866 2403 ntBASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.16□□□□□ -2.22
SMIM28A0A1B0GU29 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-407P-201ENST00000365280 104 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 SNORD114-22-201ENST00000365423 72 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-1297P-201ENST00000384415 104 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-440P-201ENST00000390882 105 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 RNY4P36-201ENST00000391116 96 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 MRPL42P3-201ENST00000401492 326 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 CHEK2P4-201ENST00000450340 246 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 AC091021.1-201ENST00000468051 388 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 AC091951.2-201ENST00000500762 203 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 AC079140.2-201ENST00000506193 142 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-470P-201ENST00000515954 104 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 RNU7-172P-201ENST00000517125 64 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 UBE2V2P2-201ENST00000587677 504 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 AC025253.1-201ENST00000613623 543 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 MIR3674-201ENST00000636576 68 ntBASIC1.15□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-1123P-201ENST00000362347 106 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-1080P-201ENST00000383982 107 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-926P-201ENST00000384075 107 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.498-201ENST00000384460 102 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MIR625-201ENST00000385047 85 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 SNORA69.1-201ENST00000390904 137 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MTCO3P19-201ENST00000415864 321 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 AC114482.1-201ENST00000418010 247 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MTND4P28-201ENST00000426217 387 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 AL135790.2-201ENST00000437701 267 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 STAG3L5P-204ENST00000443759 179 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.653-201ENST00000459091 95 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 RNU7-169P-201ENST00000459456 61 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms